| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1379 |
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| Symbol | panF |
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| ID | 8419208 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1611858 |
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| End bp | 1613336 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037954 |
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| Product | sodium/panthothenate symporter |
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| Protein accession | YP_003198244 |
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| Protein GI | 258405502 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4145] Na+/panthothenate symporter |
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| TIGRFAM ID | [TIGR00813] transporter, SSS family
[TIGR02119] sodium/pantothenate symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0385274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.372154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCAG TGAATGTGCA GGTCCTTGTG CCGCTGGCCA TCTATCTGGG ATTGATCTAC
GCCTTGGCGG TTTACAGCAA TCGGGTCTTG TCCCGGGCCG GCAATTTTCT GGAGGAATAT
TTCATCGGCA GTCGCGGCAT GGGTGGTTTT GTCCTGGCCA TGACTCTAGT AGCTACCTAC
ACCAGCGCTT CCAGTTTCGT TGGTGGCCCC GGTGTGGCCT ACAAGATGGG ATTGGGCTGG
GTCTTTCTGG CCATGATCCA GGTGCCCACG GCTTGGCTGA CCCTCGGTGT GCTGGGCAAG
AAATTCGCGA TCATCGCCCG CCGAGTCAAC GCAGTGACCA TCAGCGACAT CCTCCGGGCC
CGATATGAAA GCCGATGGGT GGTCGGACTG ACTTCACTGG CTCTGGTTGT CTTCTTTATA
GCCGCAATGG TGGCCCAATT CATCGGCGGG GCCCGTCTTT TTGAAGGTGC CACGGGCCTG
TCCTACCATA CGGGGCTGTT TATCTTTGCG GCCACCGTTA TTCTGTATAC CACAGTCGGT
GGTTTCCGGG CCGTGGCGCT GACCGATGCC GTTCAGGGAC TGGTGATGGT TTGTGGCATG
GGCGCCCTTT TTTGGGGCCT GCTCCATGCG GGCGGCGGGA TTGGCCCTAT CGTCGAAAGC
CTGCGGGAGA CCGACCCTGC GCTGCTGACC CCCTTTGGCC CTGATGATTT TCTTTCCAAA
CCGTTTATCC TTTCGTTTTG GGTGCTTGTC GGCTTGGGAG TGATCGGTTT GCCCCATGCC
GGGGTGCGCT GTTTTGGGTA TCGCGACAGC CGGTCCATGC ACACGGCCAT CGTTTTGAGT
ACCGCCGTAT TGGGGGCGGT CATGCTCGGT ATGCATCTCT GCGGAGCACT GGGCCGGGCA
GTGATTCCCG GCCTGGAGGT CGGAGATAAA ATTTTGCCCC TTTTGAGCCT TGAAGTGCTG
CCGCCAGTGG TGGCCGGGCT CTTTCTGGCT GGCCCGCTGG CCGCGATCAT GTCCACGATC
GATTCTCAAC TCATTCTCGC TTCGGCTACG CTGATCAAGG ATGTCTACAT CCATTGTTTT
CAACCGGATG CGGCCACAGA CAGTGGGGCC AGAAAGCGCT TGCACCAGTT GAGTTTTTAC
ACCACAGCGC TTATCGGCAT TATCGTCTTC CTGGCGGCCT TACGTCCCCC GGACCTCATT
GTCTGGCTCA ATCTCTTTGC CTTCGGCGGC CTGCAGGCGG CATTTTTCTG GCCTCTGGTG
CTGGGGTTGT ATTGGCGTCG GGCCAATAGC GCCGGAGCTT TGGCATCCAT TGTGGTCGGT
GTCGGTTCCT ATTTTGTCTT CAATATCGTT TGGGACCGCT TTTGGGGGAT GCATGTCATT
GTCCCGACCT TGGTCCTGGG GGGGCTGGCC TTTGTGGTGA CCAGTCTGGG CACCAGTCCG
CCCCGCAGGG TGGTCTTGGA CGTGTTTTGG GGAAAATAG
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| Protein sequence | MEAVNVQVLV PLAIYLGLIY ALAVYSNRVL SRAGNFLEEY FIGSRGMGGF VLAMTLVATY
TSASSFVGGP GVAYKMGLGW VFLAMIQVPT AWLTLGVLGK KFAIIARRVN AVTISDILRA
RYESRWVVGL TSLALVVFFI AAMVAQFIGG ARLFEGATGL SYHTGLFIFA ATVILYTTVG
GFRAVALTDA VQGLVMVCGM GALFWGLLHA GGGIGPIVES LRETDPALLT PFGPDDFLSK
PFILSFWVLV GLGVIGLPHA GVRCFGYRDS RSMHTAIVLS TAVLGAVMLG MHLCGALGRA
VIPGLEVGDK ILPLLSLEVL PPVVAGLFLA GPLAAIMSTI DSQLILASAT LIKDVYIHCF
QPDAATDSGA RKRLHQLSFY TTALIGIIVF LAALRPPDLI VWLNLFAFGG LQAAFFWPLV
LGLYWRRANS AGALASIVVG VGSYFVFNIV WDRFWGMHVI VPTLVLGGLA FVVTSLGTSP
PRRVVLDVFW GK
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