| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1314 |
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| Symbol | |
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| ID | 8419143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1540171 |
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| End bp | 1540716 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037890 |
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| Product | pyruvoyl-dependent arginine decarboxylase |
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| Protein accession | YP_003198180 |
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| Protein GI | 258405438 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1945] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00286] arginine decarboxylase, pyruvoyl-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.555968 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0182689 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACGTTCG TTCCCAGTAA GGCCTTTTTC ACCAAGGGAA TTGGCCGGCA CAAGAATAAG
TTGCAGTCGT TTGAACTGGC CTTGCGCGAC GCACGCATTG AAAAGCAGAA CCTGGTCTAC
GTGTCCAGTA TCTTCCCGCC CAAATGCAAG ATCATCAGTG TCGACGAAGG GGTCGAGTAC
CTCTATCCCG GTCAAATCAC TTTTTGCGTC ATGGCCCGCA ATGCGACGAA TGAAAAGGGG
CGGCTGGTTG GGTCCGCCGT GGGAATGGCT TTTCCTGCGG ACGAGAGCCA CTACGGCTAT
ATCTCCGAAC ACCACGCCTT CGGGGCTGAA GAACTCGAGA TTGGGGATTT TGCCGAAGAC
CTGGCTTCGA CCATGCTGGC CACGACCCTG GGCATCGATT TCGATCCGGA AAAGGATTAT
GACGAGCGAA AGCAGATCTA CCATATGAGC GGCAAGATTA TCGATTCTGC TTCCGCGCCG
TGCGTCACCC GCGGCCAGGC CGGATTGTGG ACGACGACCA TTTCCGCGGC GGTCTTTATC
CCCTAA
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| Protein sequence | MTFVPSKAFF TKGIGRHKNK LQSFELALRD ARIEKQNLVY VSSIFPPKCK IISVDEGVEY
LYPGQITFCV MARNATNEKG RLVGSAVGMA FPADESHYGY ISEHHAFGAE ELEIGDFAED
LASTMLATTL GIDFDPEKDY DERKQIYHMS GKIIDSASAP CVTRGQAGLW TTTISAAVFI
P
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