| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1290 |
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| Symbol | |
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| ID | 8419119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1512176 |
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| End bp | 1512889 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037866 |
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| Product | pseudouridine synthase Rlu family protein, TIGR01621 |
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| Protein accession | YP_003198156 |
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| Protein GI | 258405414 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR01621] pseudouridine synthase Rlu family protein, TIGR01621 |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.392817 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGAAA CCATTGCCGA AGACGAACGT TTTCTCTGCA TCCACAAAGA TCCGGGGGTG
GATTGCCACA CCGACAACGG GTCGTCAGGG GTGATCCGGG CCGTACAATC GGCTTACCGA
ATCCGATTGT TCCCTTTGCA CCGCTTGGAC AAGGTCACCT CCGGGTTGCT TTTGTTGGCC
AAGGACCGGG AAACGGCCCG GAGTATGGGG GAACTGTTCA GTGCGCATCG GATCGACAAG
TTCTACCTGG CCTTGAGTGC AAAGCGACCG CGGAAAAAAC AGGGCACGGT CATCGGGGAT
ATGCGGCGCA GCCGGCGCGG TACCTGGCGC CTGGAGCGCA GCCGCGAAAA TCCAGCCGTG
ACCCAATTTG TCAGCCGGGC CTGGAGTGGC GGCAAACGTG CCTTTCTGCT TCGTCCCCAA
AGCGGCAAAA CCCACCAATT GCGCGTTGCG TTAAAAAGTC TCGGGGCACC GATCCTCGGC
GATCCCCTCT ATGGTCCACG CAACCACTCC CAGGACCGCT GTTATCTGCA CGCCATGGCC
GTCAGTTTTG AACTTGACGG GGAGCGGTAT TCGTTCTGGA CACCGCCACG ACATGGAGAA
CATTTTCTGG ACCCGGACGG TAGCGAGGTC CTTGCGGCCT GGAGCCGTCC GGAAGAACTC
GCTTGGCCAC GGATTCCCGG GTCCGGGCAG CCCTCTTGGA CAGCGGGGCG GTAA
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| Protein sequence | MYETIAEDER FLCIHKDPGV DCHTDNGSSG VIRAVQSAYR IRLFPLHRLD KVTSGLLLLA
KDRETARSMG ELFSAHRIDK FYLALSAKRP RKKQGTVIGD MRRSRRGTWR LERSRENPAV
TQFVSRAWSG GKRAFLLRPQ SGKTHQLRVA LKSLGAPILG DPLYGPRNHS QDRCYLHAMA
VSFELDGERY SFWTPPRHGE HFLDPDGSEV LAAWSRPEEL AWPRIPGSGQ PSWTAGR
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