| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1272 |
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| Symbol | |
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| ID | 8419100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1492485 |
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| End bp | 1493429 |
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| Gene Length | 945 bp |
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| Protein Length | 314 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037847 |
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| Product | protein of unknown function DUF6 transmembrane |
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| Protein accession | YP_003198138 |
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| Protein GI | 258405396 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG5006] Predicted permease, DMT superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.162759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.535938 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGAAGA ACAAACCGAT GTATCCGGAG GTGAGCCAGG ACGGACTGCT GCTGTTCGTT
GTCGTGTCCT GGGGTATGAC ATTCCTGTTC ACCAAACTGG GACTGCCCAG CTTTCCGGTG
CTCAATTTCG CAGCCATGCG CACCTTTGCC GCGGCCGGAA CGCTGACGGT CTGCGCCGGG
ATTCTGCTCC GGCACCGCCC CCACTCCAGG TTGACACGGG GGGACCATGT TCTGGCCCTG
TTGCTCGGCG GTCTGGGCAT GGGGTGTTTC CCGTATGTTT TTTCCCTGGC CATGAGCCAG
ACCAGCGCGG CCAACGCTGG ATTGATCTTT GGGGCCACAC CAGTGGCCGT CGGCGGCATG
AGCGCTCTTT TGGGACTGGA GCGCTTGCGG GCGAAGGATT GGCTTGGGCT GTCGTGTTCG
TTCGCTGGTA TCGCCCTGGT CTCCGTAAGC TCCCTTTCTA CTGTGGGCAT TGCCGACCTG
CAAGGGGATA TGCTTATGTT CCTGGCCATG CTCATGTGGG CCGGTTATAC GGTGGGCAAT
CGTTTTGTCT CCGAATCGGC CTCCCGGGTC CATTTCACTG CTCTGGCCTC CCTGTGGGGC
AGTACCTTGT TGTGTTTGAT GCTCGGTCCG GCATTGTTCA GATTTTCCTG GTCCACTGTC
ACCCCTTCCG CGTGGACCGG CGTCTTTGGT GCCGGGGTTC TGGGCACAGG CATCGCTTAC
GTGTTGTGGA GTTCGAGCGT CAAAAAAGTC GGACCGGCCC GAACGGCAGT GTATATGAAT
CTCGTGCCGC TGGTCGCGGC CGTATGCGGG GCCGTTGTCC TGCACGAGCC GTTGCGGCTG
GTCCATCTGC CGGCGGCAGT GGCGGTCATG ACCGGCGTGG TCCTGACCCG GGGGCAATCG
CGGAAACGGA GCGCGGAATG GAGTTCCAGA GCCGAACACG TCTGA
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| Protein sequence | MLKNKPMYPE VSQDGLLLFV VVSWGMTFLF TKLGLPSFPV LNFAAMRTFA AAGTLTVCAG
ILLRHRPHSR LTRGDHVLAL LLGGLGMGCF PYVFSLAMSQ TSAANAGLIF GATPVAVGGM
SALLGLERLR AKDWLGLSCS FAGIALVSVS SLSTVGIADL QGDMLMFLAM LMWAGYTVGN
RFVSESASRV HFTALASLWG STLLCLMLGP ALFRFSWSTV TPSAWTGVFG AGVLGTGIAY
VLWSSSVKKV GPARTAVYMN LVPLVAAVCG AVVLHEPLRL VHLPAAVAVM TGVVLTRGQS
RKRSAEWSSR AEHV
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