Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1261 |
Symbol | |
ID | 8419089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1478966 |
End bp | 1480111 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037836 |
Product | iron-containing alcohol dehydrogenase |
Protein accession | YP_003198127 |
Protein GI | 258405385 |
COG category | [C] Energy production and conversion |
COG ID | [COG1454] Alcohol dehydrogenase, class IV |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.528177 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0459015 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTC AGTTTGCTAT GCCGAGTGCG GTTCGTTTCG GTCCCCGCGT GGCGTCGAGT ACAGGCGATG TTGTAGCAGG TATGGGCGGA AGCAAGGTCC TGTTCATTTA TGATGCCGGG GTGGAGGCAG CCGGCTTGAC AGAGGGGGTG CGGCAAAGTC TTGAGGACCA AGGTCTGGAA GTGTTTGATT ACAACGGTGT ACTGGCCAAT CCGCCGGACA CCATTGTTGA GGAGACAGCA GCCTGGGCCA AACAAGCGGG CGTGGACAGT CTGGTGGCCC TCGGCGGGGG GAGTTCCATC GATTGCGCAA AAGCGATCAA TATTTTGCTG ACCAACCCTG CTCCGATTAC TCAGTATGAT GGATTGGGAT TGGTCTACGC TCCGACGTTG CCCTTGGTGG CCCTGCCGAC CACAGCCGGA ACCGCCAGTG AAGTGACCTC GTTTACGATT ATCACTGACA CGGTGCGCAA AAAGAAAATG GTCATCGGTG GTCCTCATGT GGGGGCGGAT ATGGCCTTGC TGGACCCCGA ACTCACAGTG GGACTTCCCC CAGATATCAC CGCATCCACC GGGATGGACG CGTTGACCCA CGCCATTGAG GCCTATGTGT CCAAGGGAGC TATGGTGCCC ACGGACATCA ACGCGTTGAA GGCTATAGAG TTGATCGCCC AGTATATCAA ACGCGCCACC GAAGACGGCA CGGACCGGGA AGCACGGGAA AATATGCTTT TGGGGAGTAT GCTGGCCGGT TTCGCCTTTA ATTCGGCGGT CCTCGGCCTC GTTCATTCCA TTGCCCATCC CTTGAGTGTG CATTGCGGCC TGCCCCACGG CGTGGCCAAT GCCTGCGTTC TCCCCTATGT TATGGCCTAT AACGCCCCGG CCGTGCCGGA ACGGATGCGG GGAATCGCCC GCGCCTTAGG CATTGATGTG ACCGGACAAT CGCAGAAAGA AAGCGCCCAG GCCGCCGTGG ACCTTGTCAG CCGGTTGCGG CGAGACTTGG CCATTCCCTC GCTGTCGGCA CTCGGGGTCC GTCAGGACCA CTTCGACCGT GTCGCTGACG ACGCGTTGCA AGAAATAAGT ACTCTTTTTA ATCCCAAGCA ACCAACCAAA GAGGATGTGA TGTCGATTTT GAAACAGGCC TTGTGA
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Protein sequence | MEFQFAMPSA VRFGPRVASS TGDVVAGMGG SKVLFIYDAG VEAAGLTEGV RQSLEDQGLE VFDYNGVLAN PPDTIVEETA AWAKQAGVDS LVALGGGSSI DCAKAINILL TNPAPITQYD GLGLVYAPTL PLVALPTTAG TASEVTSFTI ITDTVRKKKM VIGGPHVGAD MALLDPELTV GLPPDITAST GMDALTHAIE AYVSKGAMVP TDINALKAIE LIAQYIKRAT EDGTDREARE NMLLGSMLAG FAFNSAVLGL VHSIAHPLSV HCGLPHGVAN ACVLPYVMAY NAPAVPERMR GIARALGIDV TGQSQKESAQ AAVDLVSRLR RDLAIPSLSA LGVRQDHFDR VADDALQEIS TLFNPKQPTK EDVMSILKQA L
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