Gene Dret_1261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1261 
Symbol 
ID8419089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1478966 
End bp1480111 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content57% 
IMG OID645037836 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_003198127 
Protein GI258405385 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.528177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0459015 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTC AGTTTGCTAT GCCGAGTGCG GTTCGTTTCG GTCCCCGCGT GGCGTCGAGT 
ACAGGCGATG TTGTAGCAGG TATGGGCGGA AGCAAGGTCC TGTTCATTTA TGATGCCGGG
GTGGAGGCAG CCGGCTTGAC AGAGGGGGTG CGGCAAAGTC TTGAGGACCA AGGTCTGGAA
GTGTTTGATT ACAACGGTGT ACTGGCCAAT CCGCCGGACA CCATTGTTGA GGAGACAGCA
GCCTGGGCCA AACAAGCGGG CGTGGACAGT CTGGTGGCCC TCGGCGGGGG GAGTTCCATC
GATTGCGCAA AAGCGATCAA TATTTTGCTG ACCAACCCTG CTCCGATTAC TCAGTATGAT
GGATTGGGAT TGGTCTACGC TCCGACGTTG CCCTTGGTGG CCCTGCCGAC CACAGCCGGA
ACCGCCAGTG AAGTGACCTC GTTTACGATT ATCACTGACA CGGTGCGCAA AAAGAAAATG
GTCATCGGTG GTCCTCATGT GGGGGCGGAT ATGGCCTTGC TGGACCCCGA ACTCACAGTG
GGACTTCCCC CAGATATCAC CGCATCCACC GGGATGGACG CGTTGACCCA CGCCATTGAG
GCCTATGTGT CCAAGGGAGC TATGGTGCCC ACGGACATCA ACGCGTTGAA GGCTATAGAG
TTGATCGCCC AGTATATCAA ACGCGCCACC GAAGACGGCA CGGACCGGGA AGCACGGGAA
AATATGCTTT TGGGGAGTAT GCTGGCCGGT TTCGCCTTTA ATTCGGCGGT CCTCGGCCTC
GTTCATTCCA TTGCCCATCC CTTGAGTGTG CATTGCGGCC TGCCCCACGG CGTGGCCAAT
GCCTGCGTTC TCCCCTATGT TATGGCCTAT AACGCCCCGG CCGTGCCGGA ACGGATGCGG
GGAATCGCCC GCGCCTTAGG CATTGATGTG ACCGGACAAT CGCAGAAAGA AAGCGCCCAG
GCCGCCGTGG ACCTTGTCAG CCGGTTGCGG CGAGACTTGG CCATTCCCTC GCTGTCGGCA
CTCGGGGTCC GTCAGGACCA CTTCGACCGT GTCGCTGACG ACGCGTTGCA AGAAATAAGT
ACTCTTTTTA ATCCCAAGCA ACCAACCAAA GAGGATGTGA TGTCGATTTT GAAACAGGCC
TTGTGA
 
Protein sequence
MEFQFAMPSA VRFGPRVASS TGDVVAGMGG SKVLFIYDAG VEAAGLTEGV RQSLEDQGLE 
VFDYNGVLAN PPDTIVEETA AWAKQAGVDS LVALGGGSSI DCAKAINILL TNPAPITQYD
GLGLVYAPTL PLVALPTTAG TASEVTSFTI ITDTVRKKKM VIGGPHVGAD MALLDPELTV
GLPPDITAST GMDALTHAIE AYVSKGAMVP TDINALKAIE LIAQYIKRAT EDGTDREARE
NMLLGSMLAG FAFNSAVLGL VHSIAHPLSV HCGLPHGVAN ACVLPYVMAY NAPAVPERMR
GIARALGIDV TGQSQKESAQ AAVDLVSRLR RDLAIPSLSA LGVRQDHFDR VADDALQEIS
TLFNPKQPTK EDVMSILKQA L