| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1247 |
|---|
| Symbol | |
|---|
| ID | 8419075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1461708 |
|---|
| End bp | 1462229 |
|---|
| Gene Length | 522 bp |
|---|
| Protein Length | 173 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 645037822 |
|---|
| Product | Redoxin domain protein |
|---|
| Protein accession | YP_003198113 |
|---|
| Protein GI | 258405371 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2077] Peroxiredoxin |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.00450523 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.919673 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGAAC GCTCTGGTTT GATCACCATG AAAGGCAACC CGTTGACCTT GACGGGCACG
CCGTTGACCG TCGGAGATAC GGTGCCGGAC GTCACCTTGC TCAATACCGG GCTCGAACCT
GTCCGGTTGA GTGATTACAA GGACAAGGTT CTTATCCTGG CCAGTGTCCC GTCTCTGGAC
ACCTCGGTCT GCTCCGAGGA AACCAAGCGG TTCAATGCCG AGGCCGCCCA ACTCTCCCCG
GAAATCAATG TGCTGACCAT CAGTATGGAT CTGCCTTTTG CCCAGAAACG GTGGGTGGAT
ACCTACTTGG CCACGAACGT GACCACCTTG TCGGACCACA AGGATGCCAC CTTCGGCACC
AGTTTTGGGG TCTTGATCAA AGAGTTGCGT CTTCTGGCCC GCGCTGTGTT CGTCGTGGGC
AAAGACGGCA CCCTCGCCTA CCAGCAACTG GTGGGTGAAG TGACCGATCC GCCGGACTAC
GACGCCGCGC TCGGTGCGGC CAGGCAACAG GTCAGCGCCT GA
|
|---|
| Protein sequence | MSERSGLITM KGNPLTLTGT PLTVGDTVPD VTLLNTGLEP VRLSDYKDKV LILASVPSLD
TSVCSEETKR FNAEAAQLSP EINVLTISMD LPFAQKRWVD TYLATNVTTL SDHKDATFGT
SFGVLIKELR LLARAVFVVG KDGTLAYQQL VGEVTDPPDY DAALGAARQQ VSA
|
|---|
| |