Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1245 |
Symbol | |
ID | 8419073 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1460116 |
End bp | 1460901 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645037820 |
Product | dienelactone hydrolase |
Protein accession | YP_003198111 |
Protein GI | 258405369 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.00955102 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGCA TACTTTTGCT GGCATTATGT CTGGGCTGTC TGCTCGGTCC CGCTGTGACC ACCGGGTGGA CCGATATTGT GACCACCACC GAACACTATA CCGTGGATGG GACCCGCTAT GAGGGCTTTT TTGCCCGCAA CACCCAACTG GGCAACATGC AGCCTGTGGT CGTCCTCATC CACGATTGGG ACGGGCTGGG GGAATATGAG CAAACCCGAG CCCGCATGCT GGCCCGGGCC GGATACGCCG CTTTTGCTGT TGATCTCTAC GGAAAAGGCG TCCGGCCCCA TACCCTCGAG GCCAAGCGGA CCCGCAGCGG TGCACTCTAC AAGGACCGTG AAGAGTTTCG AAAACGGTTG TTCGGCAGCC TTGCAGCCCT GGACGGCCTG GAGGGAGTGG ATCCCGGCCG GGTCGTAGTC CTAGGGTATT GTTTTGGCGG TGCGGCAGTG CTGGAACTCG CCCGAGCGGG CGCGGATCTT CAGGGAGGGA TCTGTTTTCA CGGCGGGCTG ACAACCCCGG AAGGACAGCA TTACGCCGAA CTCAAAGGGC CGCTGCTTAT TTTGCACGGG ACCGAGGACG CGGTCGCTCC GATGGAGGAT GTCCTCAGCC TGACCCGGGA TCTGGATACC GTAGATGCCA CGTTTCGCAT CAAGCTCTAC AGCGGCACCG GCCACGCTTT TACCGAATGG TCAGGGGACC GTTACGCGGC CACGGCCGAT CTCGATTCCT GGCAGGAATG TCTGCGTTTT CTGGAGGCCA GGCTGGGAAA CGGGACTCAA CGGTGA
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Protein sequence | MIRILLLALC LGCLLGPAVT TGWTDIVTTT EHYTVDGTRY EGFFARNTQL GNMQPVVVLI HDWDGLGEYE QTRARMLARA GYAAFAVDLY GKGVRPHTLE AKRTRSGALY KDREEFRKRL FGSLAALDGL EGVDPGRVVV LGYCFGGAAV LELARAGADL QGGICFHGGL TTPEGQHYAE LKGPLLILHG TEDAVAPMED VLSLTRDLDT VDATFRIKLY SGTGHAFTEW SGDRYAATAD LDSWQECLRF LEARLGNGTQ R
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