| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1220 |
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| Symbol | |
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| ID | 8419048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1428505 |
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| End bp | 1430286 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037795 |
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| Product | Uncharacterized protein family UPF0324 |
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| Protein accession | YP_003198086 |
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| Protein GI | 258405344 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2855] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00698] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000121334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAACC AGGATGACAG CCAGAGCACT GTTCGCGAAC AGCGCATGAG CATGTGGAAA
CAATTGTACA AGACCGAGGA CTATTGGGCC ATTTGGTTGG CCGGCTTGTT TTTTGTGGTC
GCGGTCGTTT GTGTCATGAC GTGGAAGCCG GCCGTTGAGG AGCTGCCGGA ATACCGTGCG
ATCATGAACG AGGAGATGGA CAAGGCCGGA TTCCGGACCA TCGCGTATAC CGAAGCTGAA
GATGCGATGG ATGGCATCCA GGCCAAAAAA GAGGGGTTCA CTTCGGTCAT CTATAATTTG
ACCAATCGTC CCAAAGGGTG GACGAGCAAC CCGCTCAACT CGATCTACAT GAGTGAAGAA
CAGGCAGCCA AAAAGCGCGC AGCTGCTGCC GATCGCTTTG AGGCGGCCAA AGAAGAACTC
GCTCAGGCAC GGGCGGAGGC GGAAAAAGCT GAAGCCGCAG CAGCTGCTGC GAATTTTGAA
GACAAGGAAC TCAACCAAAA GGCCAAGGCA TCCATCACGA AATGGCGTCA AGCCAAGTCG
TCTCTGTCAT CGGCGAAAAG CGCCGCCACT GCCCAACCCT ACAACCTCAT CCCCAGCCTG
ATCGTGCTCG GTATTGTGAT CATGCTCTTT TTCGCTATCG GGGCACGTTT TATCGGCATC
AACCTCCGGG ATTTCTTTAA AGGATTCCCG GTTATTTTTG TCCTGGCCTG TATAGCCTAT
TTGATCAGTA GTCAGGCCAC GCTGAAGGCA CTGGGACTTT CCTACGTGCT GTTTGCTCTG
GCCTTGGGAT TGATCATTTC CAACACATTG GGCGTGGCCC GTTGGATCAA AACTGCCGGG
CAAACCGAGT TCTTTATCAA AACCGGGCTT GTTCTGCTTG GGGCACGAAT CTTGATCGGG
CAGATCGCCC TGATCGGGAT TCCCGGTATC TTTGTCACCT GGGTTGTGAC ACCTATTGTC
CTGGTGACCA CATTCTGGTT TGGTCAGAAT GTGATCAAGA TGCCGTCCAA GGAACTGAAC
ATCACCATGT CTTCTGATAT GTGCGTTTCT GGTGTGTCCG CGGCCATTGC CAGTGCCTCG
GCCAGCGGTG CGAAAAAGGA AGAATTGACC CTGTCTATCG GCATGTCCAT GATCTTTGTG
GCCGTGATGA TTTTTGCACT GCCCGCTATT GCGAACATGA CAGGCATGCA CCCGGTTTGG
GCAGGCGCTT GGTTGGGTGG AACAGTGGAT AACACCGGAT CGGTTGTCGC CGCCGGTGAG
TTGATCGGTA TGGAAGCCAT GTATGTGGCG GCCACGATTA AAATGATCCA GAATGTGATG
ATTGGTGTGA TCGCTTTTGG CGTTGCCGCC TATTGGTGCT TGCGCGTCGA ACCGCAACGT
GCCTGCAAGC CTGGCGAAAC GCCCATGAAG CTGACCGCCG GCGGGGCGCT GATGGAAGTC
TGGTATCGCT TTCCCAAGTT TATCCTGGGC TTTATCGGCG CGTCGGTCAT TTTCTCGCTG
ATGCAGACCG GTGTGAATAT GGATTGGGGC CAAGCCATGG TGAATGATGG AATCCTGGCC
ATGGCAAACC GGTTCCGCGG TTGGTTCTTC TGCCTGGCCT TTGTCAGCAT CGGCTTGAGC
ATCAACTACG GGGAACTCAA AGAGCCCTTG CGTGGTGGCA AGCCCTTGTT GCTGTATGTC
TCCGGCCAGA CGTTGAACCT CATCTTGACT CTGTTCGTCG CCTGGCTCAT GTTTATGGTT
ATTTTCCGCG ACATCACTGA TATGTTGATG GCCGGCGCCT AA
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| Protein sequence | MANQDDSQST VREQRMSMWK QLYKTEDYWA IWLAGLFFVV AVVCVMTWKP AVEELPEYRA
IMNEEMDKAG FRTIAYTEAE DAMDGIQAKK EGFTSVIYNL TNRPKGWTSN PLNSIYMSEE
QAAKKRAAAA DRFEAAKEEL AQARAEAEKA EAAAAAANFE DKELNQKAKA SITKWRQAKS
SLSSAKSAAT AQPYNLIPSL IVLGIVIMLF FAIGARFIGI NLRDFFKGFP VIFVLACIAY
LISSQATLKA LGLSYVLFAL ALGLIISNTL GVARWIKTAG QTEFFIKTGL VLLGARILIG
QIALIGIPGI FVTWVVTPIV LVTTFWFGQN VIKMPSKELN ITMSSDMCVS GVSAAIASAS
ASGAKKEELT LSIGMSMIFV AVMIFALPAI ANMTGMHPVW AGAWLGGTVD NTGSVVAAGE
LIGMEAMYVA ATIKMIQNVM IGVIAFGVAA YWCLRVEPQR ACKPGETPMK LTAGGALMEV
WYRFPKFILG FIGASVIFSL MQTGVNMDWG QAMVNDGILA MANRFRGWFF CLAFVSIGLS
INYGELKEPL RGGKPLLLYV SGQTLNLILT LFVAWLMFMV IFRDITDMLM AGA
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