| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1185 |
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| Symbol | |
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| ID | 8419013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1393813 |
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| End bp | 1395903 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 645037760 |
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| Product | signal transduction histidine kinase, nitrogen specific, NtrB |
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| Protein accession | YP_003198051 |
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| Protein GI | 258405309 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3852] Signal transduction histidine kinase, nitrogen specific |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATT CCATACAGAG CATATTAGAC CATAAAGATC TAATATCTAT CCCTCAGAGT
CTAGTAAATA TATTAAAGAT TTCTAATAAT GCAGATGTTG AAGTAGATGA ACTAGCTGAT
GCCCTACAAA GAGATCCTAT TGTTACGGCT CGGATGTTTG GATTTGCTTC TACAATACAG
TATAGACCTT GGAAGGAAGT TCAAAACATA AAAAAATTAA TAATTGTGAT TGGCTTAGAT
AATGTAAGAA AAATAATTTA CGCAAGCGTC ATAAATCAAA TTTTTTCCAA AATAAAAAAT
GAACTTTATG ATTTCTATTA TCAATTGTGG AGCCAGTCTC TTTTATGTGC AAATATAAAT
GAAGAGCTGG CTCGTATAGC TTGCTTTGAA GATAGACATG AATTTTACCT TTCCGGCCTT
TTGCATAGAA TAGGCCAATT TGCCTTGGTA GGCTACGATG ATAGAATGTA TCGAAATGTC
GCTTCGCTGT CAGCCGGTTT AGTAAACTTA GAAGAAATTG AGCGTCAAAG TTGTGGTTTT
ACCTCTTCTG AGATAGGGGC CGAGGTGGTC AAAAGATGGG AATTGCCGTC GTTCATATCA
GATTCGATTC AATATCAAAC GCTGCCATTT GAAAAAATAA ATTCAGGAGC TGATATAATT
CGCACTTTGA ATTTGTCGCA AAAAATATCA AGTGGTGGTG TGAATCAAAT ACATGCAAAT
TTACATGCCA TAAATTCTGC ATTTGGGCTT ACTGAGGGGT TGCTATTTCA GATATACAAC
GATGCATACA ATAAAACATT GAATATGATC GAAGAAATGA CTGGATTTCG TGAAAACAAT
CTAGTCAAAA GTTTTCAAGA TAGCTTTAAA GCAAGTAGCG AAAATCTCAA CACTCTTGTC
CAACAAAAAG CTTTGGTTGA CTCTGTAGGT TTAAAAAATC ATCAGAACAT CTCATATGAA
AATTTCTTGA GGCAAATACG AGAAGATCTG CTTATTCTAT TTGGGTTTGA TAATGTTTGT
TTCTTTGTCA GAGGAATGAA CGGTCAAAAT ATTTATGGCA TTGATGATAC GGGAAATTTC
ACGCAGATTA AAAAGTTGAA AATAAGTTTA GTGGATAACA ATGAATTTTA TAAAAAACAT
ATATACCCTC AAAAAATAAC GTTTTTAGAA TATAAGGACC TCCAAAAGTA CAACATTTTA
GAGAAGCAAC TTTTTGATAT TTTACAAGCC GACAGGCTAT TAGTTTACCC ACTTTTTTGT
GCTGATAAAT GTTACGGCCT CATCGTCATA GAGAATGTAA ATGAAATCAA CGATACTAAG
CTTTCTTTTA TCAAGCTGGT TGTTGATAGC ATAGCCCAAA AAATATCGAA CGCTGGTGCT
GATGATTTTA AGACTAAAGA GCACTTTGAA TTACAGATAC GAACTGCCGT ACATGAAATG
GGCAACCCAT TGTCAATAAT AAATACATAC TTGCATATTT TAAAAGAAAA ATTAGATGTG
GATGATGAAA TTTCTTCACA AATTGAAATG ATCCAAAATG AAATTCAAAG AGTTGGTGAA
ATAGCAGCAG GTCTTCGAAA TATAAATGAG CTGAAAGACC AAGAGGTGGC TGTCGATATT
AATCGACTTT TAAATCACCT TACAAATTTT TTCGAAAAAT CTATTTTTGA AAATAAGAGC
ATCACATGTA CTGTTAACCT AGATGAGCCT CTTCCTGTAA TCCAGGCCAA TGAAGATAAA
TTAAAACAGA TAGTTATCAA TATAATCAAA AATGCTGTGG AGTCTTTCAC AGATAGTGGA
CAATTGTGGC TCACGACACG TGACAATGTC ATCAGCAATG GCACATTTTA TATTGAAATC
GAAATCGAAG ACAATGGGCC CGGCATAGAC AAAAATATTT TTGAAACGAT ATTTCACCCC
CATGTCAGTA CCAAAAACGG GCATTCCGGA CTCGGACTGT CCGTGGTTAA AAGCCTGGTT
GCAGATATAA AGGGAGATAT CCGTTGTGCA ACTGGAAGAA AAGGGTCTCG ATTCCAAATA
CTTATTCCTA GAGAAGTCGC TCAAGATAAT CTGGGGAGGA TCGATGAGTA G
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| Protein sequence | MSNSIQSILD HKDLISIPQS LVNILKISNN ADVEVDELAD ALQRDPIVTA RMFGFASTIQ
YRPWKEVQNI KKLIIVIGLD NVRKIIYASV INQIFSKIKN ELYDFYYQLW SQSLLCANIN
EELARIACFE DRHEFYLSGL LHRIGQFALV GYDDRMYRNV ASLSAGLVNL EEIERQSCGF
TSSEIGAEVV KRWELPSFIS DSIQYQTLPF EKINSGADII RTLNLSQKIS SGGVNQIHAN
LHAINSAFGL TEGLLFQIYN DAYNKTLNMI EEMTGFRENN LVKSFQDSFK ASSENLNTLV
QQKALVDSVG LKNHQNISYE NFLRQIREDL LILFGFDNVC FFVRGMNGQN IYGIDDTGNF
TQIKKLKISL VDNNEFYKKH IYPQKITFLE YKDLQKYNIL EKQLFDILQA DRLLVYPLFC
ADKCYGLIVI ENVNEINDTK LSFIKLVVDS IAQKISNAGA DDFKTKEHFE LQIRTAVHEM
GNPLSIINTY LHILKEKLDV DDEISSQIEM IQNEIQRVGE IAAGLRNINE LKDQEVAVDI
NRLLNHLTNF FEKSIFENKS ITCTVNLDEP LPVIQANEDK LKQIVINIIK NAVESFTDSG
QLWLTTRDNV ISNGTFYIEI EIEDNGPGID KNIFETIFHP HVSTKNGHSG LGLSVVKSLV
ADIKGDIRCA TGRKGSRFQI LIPREVAQDN LGRIDE
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