Gene Dret_1181 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1181 
Symbol 
ID8419009 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1388142 
End bp1389401 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content48% 
IMG OID645037756 
Productglycosyl transferase group 1 
Protein accessionYP_003198047 
Protein GI258405305 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTAGCA ACAATTACGG CCGTATTCTC TGCCTGACAT CTAACTTTCC CCGCTGGGAA 
GGCGATAGCA CCCCCCTATT TATCCTTAAC CTGGCAAAAG ACCTGCAATC CCTGGGCTGG
ACAGTGGATG TTCTGGCTCC GCATGCACCT GGAGCTGCCA AAAAGGAACG TATCCAGGGC
TTACAGGTTG AGCGCTTTCA ATACTGGTGG CCAGCGGTGA GACAAAACAT ATGCTACCAG
GGAGGGGCGC TAGTCAATCT ACGAAAAAAC AAAGCAGTCT TCAGCAAACT GCCATTTTTT
TTGTTTTTTG AATGGGAAGC CCTATACCAT CGTCTTTTAT CCAGGAAATA CGACTTAGTG
CATTCCCACT GGCTCCTTCC TCAAGGATTT ATAGGAGCTA TGGCCACACG TTTGGCCTGG
GTCCCTCATG TGGTCACCAT TCACGGCGGT GATGTGTTCG GTTTGCAGCA AAAAATTTTT
ACGCCCTTCA AGCGCTTTGC TCTGAAGCAG GCGGATACAG TCACAGTAAA CAGTTCAGCA
ACGCAACAGG CAGTGGAATC GCTCACACCT GGGTTGAAGA ATGTGCGCCG TATTTCCATG
GGTGTGGATC TGCCTGAGGC ATCTCAGGAG GATACCAAAG TACAAAGTCT GCGCCGGGAA
TATAAACAGG GCAAAGGCCC ACTAATTGTG TTTGTGGGAC GGGTGGTGGA GGAAAAAGGG
ATTGAAGATC TGATTCGGGC TGTTCCGCTC ATTGTAAAAA AATGCCTAGA CGTGCAGGTA
TTGGTTGTGG GCGAGGGCCA GGACCGCCCA GCCCTAGAAA AATTAGTTTC TAATTTGGGT
TTGACTGACA GAATTTCATT CACCGGCTGG GTGAAGGCGG AAAAGGTGCC GACATACCTG
GCGGCTGCTG ATGTCTTTGT CGGACCTTCT AGGCAGGCTA GTGACGGTTG GGTTGAAGCT
CAGGGTTTGA CTTTTTTGGA GGCAATGTCA GTAGGCACTC CTGTGGTGGC TACCAGAAGC
GGTGGAATTG TTGATTCGGT AATTCATGAA CAAACAGGTT TGCTGGTTGA AGAAAGGTCG
CCAAGTCAGA TTGCTGAGGC TGTGCTTCGG CTTGTGTTAG ATCAGGCATT AAGTCAAAAG
TTAAAAACCT TGGGCCGGAA ATTGGTCGAG AATGAATATT CTCGGGGCGA AACAGTAGCG
CAATTTAGCG ATATTTATCG AAGTTTAATC TCAAAAAAAG TAAAACAATC TCAATTGTAA
 
Protein sequence
MSSNNYGRIL CLTSNFPRWE GDSTPLFILN LAKDLQSLGW TVDVLAPHAP GAAKKERIQG 
LQVERFQYWW PAVRQNICYQ GGALVNLRKN KAVFSKLPFF LFFEWEALYH RLLSRKYDLV
HSHWLLPQGF IGAMATRLAW VPHVVTIHGG DVFGLQQKIF TPFKRFALKQ ADTVTVNSSA
TQQAVESLTP GLKNVRRISM GVDLPEASQE DTKVQSLRRE YKQGKGPLIV FVGRVVEEKG
IEDLIRAVPL IVKKCLDVQV LVVGEGQDRP ALEKLVSNLG LTDRISFTGW VKAEKVPTYL
AAADVFVGPS RQASDGWVEA QGLTFLEAMS VGTPVVATRS GGIVDSVIHE QTGLLVEERS
PSQIAEAVLR LVLDQALSQK LKTLGRKLVE NEYSRGETVA QFSDIYRSLI SKKVKQSQL