Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1173 |
Symbol | |
ID | 8419001 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1377088 |
End bp | 1378047 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 645037748 |
Product | glycosyl transferase family 2 |
Protein accession | YP_003198039 |
Protein GI | 258405297 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000473476 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTCCAA AATGCGAACC TCACCAGCCC ACTATGTTGT CAATCATCTG CCCATTGCGC GATGAGGAGG ATTCGGTTCA GCCCTTTTTT GCCCGCCTTT TGCCGGTGCT TAAGGACTTG GAGCTGGATT TTGAAATCAT TTGCGTCAAC GACGGCAGCC AGGACAAAAC ATTGGAGCGC TTGCAGGCCG CTAGGGAGCT TGAGTCGAGA ATCAGGATTC TTGATCTGTC TCGCAACTTC GGTAAGGAAG CGGCCTTAAC CTGCGGACTG GATCATACCC GAGGCCAGGC CGTGATCCCG ATCGATGCAG ACCTCCAGGA TCCACCGGAA TTGATCGTAG ACATGGTCCA CATGTGGCAG CAGGGTTGTG AAGTGGTCCT GGCTCAGCGA ACGGATCGCT CATCGGACAA CTGGCTCAAG CGCAAAACCG CAGAGTGGTT CTATCGGTTA CATAACGCCA TTTCCCGACC GACCATCATC CCCAATGTGG GCGATTTTCG CCTCATGGAT CGCAAGGTTG TTGAGGCCCT GAAAATGTTG CCTGAGCGGG GGAGATTTAT GAAAGGGATT TTTTCCTGGG TCGGATTTCG TCAGGCAATC CTCCCCTATG CTCGAGATGT GCGAAAAACA GGAAAAAGCA AATTTTCCAC TTGGCGGCTA TGGAACTTTG CCATGGATGG TATCACCTCA TTTTCCACAG TCCCCTTGCG AATTTGGACC TATTTAGGGC TGGCCATAGC TTTGGCGTCC TTTGCTTATG GTTCGTTTAT TGTCGGGCGG ACCCTGATTT TTGGCCGTGA TTTTCCGGGA TATGCCTCCT TGATCACAGT CATTCTGTTT TTCGGTGGCG TGCAACTCAT TGGTCTTGGT GTTGTTGGTG AATATATCGG CCGGATCCAT ACGGAAACCA AGGCCCGCCC TATTTATGTT GTTCGAGAAC GGTTTGAAGA TGTGACGTAA
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Protein sequence | MFPKCEPHQP TMLSIICPLR DEEDSVQPFF ARLLPVLKDL ELDFEIICVN DGSQDKTLER LQAARELESR IRILDLSRNF GKEAALTCGL DHTRGQAVIP IDADLQDPPE LIVDMVHMWQ QGCEVVLAQR TDRSSDNWLK RKTAEWFYRL HNAISRPTII PNVGDFRLMD RKVVEALKML PERGRFMKGI FSWVGFRQAI LPYARDVRKT GKSKFSTWRL WNFAMDGITS FSTVPLRIWT YLGLAIALAS FAYGSFIVGR TLIFGRDFPG YASLITVILF FGGVQLIGLG VVGEYIGRIH TETKARPIYV VRERFEDVT
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