Gene Dret_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1138 
Symbol 
ID8418965 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1334664 
End bp1335095 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content55% 
IMG OID645037712 
Productamino acid-binding ACT domain protein 
Protein accessionYP_003198004 
Protein GI258405262 
COG category[R] General function prediction only 
COG ID[COG4747] ACT domain-containing protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000787959 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.731263 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCG AACAGATCTC CATTTTCCTC GAAAACCGGG CCGGCCGTCT GGCCGACGTC 
ACCCGTGTCC TGTCTGAATC CGGAGTCAAT ATCCGAGCCT TGTCCCTGGC CGACACCTCG
GATTTCGGAA TCCTGCGCCT GATTGTCACC GACCACGAAA AGGCCAAAGC CGCATTGAAA
GAGAAGGGAT TCACGGTGGG CCGGACCAAT GTCGTGGCTG TTGAAGTCGA CGATCAGCCC
GGCGGACTGC ACAAAATCCT GGACCTCTTG ACTTCGAATT CCATTAATGT CGAATACATG
TACGCCTTTG TTCAGCAAAG CGGCAAAAAC GCGGTCCTCA TTTTCCGTTT TGATCGTACC
GACCAGGCCA TCGACGTCCT GCAGGAGCAC GGCGTGCGGA TTATTCCCGG CAGCGAACTC
TATTCCCTGT AG
 
Protein sequence
MKVEQISIFL ENRAGRLADV TRVLSESGVN IRALSLADTS DFGILRLIVT DHEKAKAALK 
EKGFTVGRTN VVAVEVDDQP GGLHKILDLL TSNSINVEYM YAFVQQSGKN AVLIFRFDRT
DQAIDVLQEH GVRIIPGSEL YSL