Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1124 |
Symbol | |
ID | 8418951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1317826 |
End bp | 1318296 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 645037698 |
Product | single-strand binding protein |
Protein accession | YP_003197990 |
Protein GI | 258405248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.228328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGGGA CACTCAACAA GGTCATCATT GTCGGACGCC TCGGACGCGA TCCCGAAGTA CGCTATACAC AAAACGGAAC GCCTGTAGGC AATCTGAACG TGGCCACCGA CGAATCTTTT AACGACCAGC AAGGACAGCG CCAGGAACGC ACGGAATGGC ACCGGATCGT GATTTTCGGG CGTCAGGCCG AAAATTGTAA GAATTATCTG CGCAAGGGGT CCCAGGTCCT GGTCGAAGGC AGTTTACAGA CTCGCAAATG GCAGGATCAG CAGGGACAGG ACCGCTACAG CACGGAGATC AAGGCCCTGC GGGTCCAGTT TTTGGATTCC CGCGGCTCTC AGCAAGGTGG CGGTGGTCAG CAGCAAGACT CCTATTCCCA GGCCGGACCG CCTCAGCAGC AATCCGGTCA GGATCAGATG GGCCCGGCGT TTCCTTCCGA AGCCAGCGCC ATGGACGATA TTCCCTTTTA G
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Protein sequence | MAGTLNKVII VGRLGRDPEV RYTQNGTPVG NLNVATDESF NDQQGQRQER TEWHRIVIFG RQAENCKNYL RKGSQVLVEG SLQTRKWQDQ QGQDRYSTEI KALRVQFLDS RGSQQGGGGQ QQDSYSQAGP PQQQSGQDQM GPAFPSEASA MDDIPF
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