Gene Dret_1124 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_1124 
Symbol 
ID8418951 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1317826 
End bp1318296 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID645037698 
Productsingle-strand binding protein 
Protein accessionYP_003197990 
Protein GI258405248 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.228328 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGGA CACTCAACAA GGTCATCATT GTCGGACGCC TCGGACGCGA TCCCGAAGTA 
CGCTATACAC AAAACGGAAC GCCTGTAGGC AATCTGAACG TGGCCACCGA CGAATCTTTT
AACGACCAGC AAGGACAGCG CCAGGAACGC ACGGAATGGC ACCGGATCGT GATTTTCGGG
CGTCAGGCCG AAAATTGTAA GAATTATCTG CGCAAGGGGT CCCAGGTCCT GGTCGAAGGC
AGTTTACAGA CTCGCAAATG GCAGGATCAG CAGGGACAGG ACCGCTACAG CACGGAGATC
AAGGCCCTGC GGGTCCAGTT TTTGGATTCC CGCGGCTCTC AGCAAGGTGG CGGTGGTCAG
CAGCAAGACT CCTATTCCCA GGCCGGACCG CCTCAGCAGC AATCCGGTCA GGATCAGATG
GGCCCGGCGT TTCCTTCCGA AGCCAGCGCC ATGGACGATA TTCCCTTTTA G
 
Protein sequence
MAGTLNKVII VGRLGRDPEV RYTQNGTPVG NLNVATDESF NDQQGQRQER TEWHRIVIFG 
RQAENCKNYL RKGSQVLVEG SLQTRKWQDQ QGQDRYSTEI KALRVQFLDS RGSQQGGGGQ
QQDSYSQAGP PQQQSGQDQM GPAFPSEASA MDDIPF