| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1111 |
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| Symbol | |
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| ID | 8418938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1303601 |
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| End bp | 1304512 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037685 |
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| Product | phosphoribosylaminoimidazole- succinocarboxamides ynthase |
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| Protein accession | YP_003197977 |
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| Protein GI | 258405235 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
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| TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0468693 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAACTG TCCAACAAAC TGAACTCTCT GGAATCGAAC TCGTTTCACG GGGCAAAGTC
CGTGACATGT ATGCCGTTGA CGAGGACAAA CTGCTCATCG TGACCACAGA CCGCATGTCC
GCCTTTGATG TCATCCTGCC TGACCCGATT CCAGGCAAGG GTATTGTCTT GAACCAATTG
ACGCTGTTTT GGATGGACCG TTTTGCTGAC CTGGTCTCCA ACCACACCTT GAATGCCGAC
GCCTCCTCCT ACCCGGCGTT CCTCGCTCCG CACGCCGAGC AACTCCGGGG CCGTTCGGTC
CTTGCCCGCC GGGCTCAGCC ACTCCCGATC GAATGTATCG TCCGTGGCTA CCTTTCCGGA
TCGGGCTGGA AAGATTACCA ACGGACCGGG ACCGTCTGCG GCCACTCGCT CCCTGAAGGC
CTGCGGGAAT CCCAACAACT GCCCGAGCCG TTGTTCACCC CGTCGACCAA AGCCGAAATC
GGCGATCACG ATGAGAACAT CACCCTGTCC CAGGCCAGTG ACCTCGTCGG CGCTGACCGT
ATGGCCCAGG TCCAATCCCT GAGTCTGCAG ATGTACAGCC GAGCCCGAGA CTACGCCCGT
CAATGCGGCA TTATCATCGC CGACACAAAA TTTGAATTCG GCCTTATTGA TGACGAACTT
GTTTTGATCG ATGAGGTCCT GACTCCCGAC TCTTCACGTT TCTGGCCTGA AGAGCAGTAC
ACTCTTGGTC AGGGGCAACC GAGTTTCGAC AAACAATACC TCCGGGACTG GCTGACAGGC
TCCGGCTGGA ATAAACAGGC CCCGGGCCCG GCACTTCCAC CCGATGTGAT TGCCCAAACC
CGGGACAAAT ACCACCAGGC CTATACCTTA TTGACCGGTG AGACCCTGGC ACTGCCCGAT
CTTTCGTCTT GA
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| Protein sequence | MQTVQQTELS GIELVSRGKV RDMYAVDEDK LLIVTTDRMS AFDVILPDPI PGKGIVLNQL
TLFWMDRFAD LVSNHTLNAD ASSYPAFLAP HAEQLRGRSV LARRAQPLPI ECIVRGYLSG
SGWKDYQRTG TVCGHSLPEG LRESQQLPEP LFTPSTKAEI GDHDENITLS QASDLVGADR
MAQVQSLSLQ MYSRARDYAR QCGIIIADTK FEFGLIDDEL VLIDEVLTPD SSRFWPEEQY
TLGQGQPSFD KQYLRDWLTG SGWNKQAPGP ALPPDVIAQT RDKYHQAYTL LTGETLALPD
LSS
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