| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1100 |
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| Symbol | |
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| ID | 8418925 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1290553 |
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| End bp | 1291644 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 645037672 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_003197966 |
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| Protein GI | 258405224 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.757445 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.166084 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCACAT TTACTATCTG TTGTCTGCCA GGGGATGGCA TCGGCCCGGA GATCACCACT
GAAGCCCAAA ACGTTCTGAC TGCGATTGGA AGGCAGTTTG GTCATACTTT TACGATGACC
GACGAGCCCA TCGGTGGCGC GGCGATCGAC ACGCATGGCG TTCCGTTGCC GGAGGCGACT
CTCCAGGCCT GCCGCGAGAG CCACGCAGTG CTCCTGGGTG CGGTCGGCGG GCCGAAGTGG
GATGCACTGG AGACAGCCAT CCGTCCGGAA AAAGGATTGC TGGCCCTGCG CAAGGGATTG
TCCCTGTATG CCAACCTCCG TCCCGCGGTT ATTTTTCCGG AACTCAAAGA GGCGTCTTAC
CTGCGTCCGG ATATTGTGGC CGACGGCGTG GACGTGCTGG TTGTGCGGGA ACTGACCGGG
GGGATTTATT TCGGCGAACC GCGCGGGCGC GAAGGCGAAC CGGGACAACG CCGGGCCATG
AACACCATGG TCTACGATGA GACCGAAGTA CGCCGTATCG GCCGGCTCGC TTTCGAAGCC
GCACAGCAAC GGGACAAACG GCTGTGTTCC GTGGACAAGG CCAATGTTCT TGAAGTCTCG
CAATTATGGC GGGAAGTCAT GAACGAACTG GCTCCCTCCT ATCCGGATGT CACCCTGGAG
CACATGTATG TCGACAATGC AGCCATGCAA CTGGTTCGGG ATCCGAAACA ATTCGATGTT
GTGGTCACTT CCAATCTTTT TGGGGATATC CTCTCCGATG AAGCCGCGAC AATCACCGGA
TCCATCGGCA TGTTGCCTTC GGCCTCCCTC GGCGACGAGA AGCCGGCTCT GTTTGAACCG
ATCCATGGCT CAGCTCCGGA TATCGCCGGT CAGGACAAGG CCAATCCGCT GGCGACCATC
CTTTCCGTGG GCATGTTGCT CCGATTCGGC CTCGGCCTGG AACAGGAGGC CGACGCCGTG
GACGCGGCAG TAGCCGACGT CATTGCCCAA GGTCTGCGTA CCGGGGATAT CGCCGGTCCT
GGCGAAGCTG TGCTCGGATG CCGTGCCATG GGTGCGGCTG TGGTTGACCG TCTCCAGGCC
CGTAAGGACT GA
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| Protein sequence | MATFTICCLP GDGIGPEITT EAQNVLTAIG RQFGHTFTMT DEPIGGAAID THGVPLPEAT
LQACRESHAV LLGAVGGPKW DALETAIRPE KGLLALRKGL SLYANLRPAV IFPELKEASY
LRPDIVADGV DVLVVRELTG GIYFGEPRGR EGEPGQRRAM NTMVYDETEV RRIGRLAFEA
AQQRDKRLCS VDKANVLEVS QLWREVMNEL APSYPDVTLE HMYVDNAAMQ LVRDPKQFDV
VVTSNLFGDI LSDEAATITG SIGMLPSASL GDEKPALFEP IHGSAPDIAG QDKANPLATI
LSVGMLLRFG LGLEQEADAV DAAVADVIAQ GLRTGDIAGP GEAVLGCRAM GAAVVDRLQA
RKD
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