| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1051 |
|---|
| Symbol | |
|---|
| ID | 8418875 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 1240602 |
|---|
| End bp | 1241798 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037622 |
|---|
| Product | 8-amino-7-oxononanoate synthase |
|---|
| Protein accession | YP_003197917 |
|---|
| Protein GI | 258405175 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0156] 7-keto-8-aminopelargonate synthetase and related enzymes |
|---|
| TIGRFAM ID | [TIGR00858] 8-amino-7-oxononanoate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.307967 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.238477 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACATG ACCACCATCA ATTTTTCCAG GACCAACTCC AGGCTCTGGA GACAGAAAAC
CAGCTACGAT CGATTCCGGA TATCGATTAC GGGGCTGACA AATACCTCGT GCTCGATGGC
CGGTCGTTAC TCAACCTCGG GAGCAACAAC TATCTTGGCC TCTCCCGCGA TCCCATACTC
CTGCAGGCAG CCACAGAAGC GCTGCAAACA TACGGCACGA CCAGCGGGGC CTCCAGATTG
GTCACCGGGA CAAATCGTCT CGCCCAGGAA CTGGAAGAAG ACCTGGCCCG TTTCAAGGAC
CAGGAAGCCG CCGTGGTTCT TGGATCCGGC TTTAGCGCCA ATCTCGCCCT GTTGACCACC
TTTGCCGATC GGCACACGGT GGTCTATTCC GATCGCCTCA ATCACGCCTC GATCATTGAC
GGAATAACGT TGTCCCGGGC CAAACATGTC CGATTCAGAC ACCGGGATAT GGACCATCTT
GCCTTCCTCA TGGACCGCCA CCGCGAGGCC CCGCGACACA TCTGCGTGAC CGATTCGGTT
TTCAGCATGG ACGGCGATTG CGCCGACTTG GAGGCCTTGG TCGGGCTGTG CCATGATGCC
AACGCCCTCC TGGCGGTGGA CGAGGCGCAT GCCGCCGGCG TATTCGGCCA AGGGCGGGGC
CTGGCGCATG CCCTTGGGCT GGAACGCGAA GTCGATCTGC ACATGGGAAC CTGGAGCAAG
GCTTTCGCCT CCCTGGGAGG GTATATTGCC GGCTCCAGGA CGGCTGTTCG CCTGCTGCAG
ACCAGGGCCC GGAGCTTCAT CTACTCCACC GCCTTGCCGC CGGCAGTCCT GGGAACCAAC
AAAGCCGCCC TCGAGTCCGT GTCCGGCACC CCGGAAGCGG GAACGGCGCT GCTGGCCAAA
GCGGCTGAAC TGCGAGCCTC CCTGGAGGAT CTAGGATTTC ATACTGGCAA CAGTCGAAGC
CAGATCATTC CCATCATGCT GGACACAAGC CACAAGGCCC AGGCGGCTCA GGCATTTCTC
AAGGAAAAAG GGGTTTTTGT CCCGGCTATC CGTCCCCCTA CCGTTCCCCG GGGACAGTCC
CGATTGCGGC TCTCTTTGCG GGCTGACCTG GAACACGCCG ATTGGACGTT GTTGCAAACC
GCGTTCAAGG CCCTGGCTGA TCACCTGGGA CCCAACGTTG GTGTGGAGGC TGTATGA
|
|---|
| Protein sequence | MAHDHHQFFQ DQLQALETEN QLRSIPDIDY GADKYLVLDG RSLLNLGSNN YLGLSRDPIL
LQAATEALQT YGTTSGASRL VTGTNRLAQE LEEDLARFKD QEAAVVLGSG FSANLALLTT
FADRHTVVYS DRLNHASIID GITLSRAKHV RFRHRDMDHL AFLMDRHREA PRHICVTDSV
FSMDGDCADL EALVGLCHDA NALLAVDEAH AAGVFGQGRG LAHALGLERE VDLHMGTWSK
AFASLGGYIA GSRTAVRLLQ TRARSFIYST ALPPAVLGTN KAALESVSGT PEAGTALLAK
AAELRASLED LGFHTGNSRS QIIPIMLDTS HKAQAAQAFL KEKGVFVPAI RPPTVPRGQS
RLRLSLRADL EHADWTLLQT AFKALADHLG PNVGVEAV
|
|---|
| |