Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_1034 |
Symbol | |
ID | 8418857 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1217503 |
End bp | 1218711 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645037604 |
Product | acetate kinase |
Protein accession | YP_003197900 |
Protein GI | 258405158 |
COG category | [C] Energy production and conversion |
COG ID | [COG0282] Acetate kinase |
TIGRFAM ID | [TIGR00016] acetate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00869824 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.811028 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGACTC TCGTCATTAA TTCCGGAAGT TCCTCCATTA AATACAAACT TTTCGATATG GAGAGCGAGG CTGTCCTTGC TGCCGGCGTT ATTGAGCGCA TCGGCGAAGA GAGCAGCAAG CTCGAGCACA AAAAATATCC TGGCACCGAA CGCGAGGGCA AGACGGAACA AAACGATCGC GTGGCCAATC ATGAAGAAGG CTTGGGCAAG GTTGTCGCCC TGCTCACGGA CGCCGACTAC GGGGTCATCC GCGACCGCGC GGAAATCGAT GCCGTGGGAC ACCGCGTCGT GCATGGCGGG GAAGCCTTCC ACGCCCCGAC CGTGATCGAC GATTCGACCA TTGCGGCCAT CGAGGCCAAC GCCTCCCTGG CCCCCTTGCA CAATCCGGCC AACCTGACCG GCATCAAGGT CGCCCGGGAG ATGTTCAAGG ATGTGCCTCA GGTGGCTATC TTTGACACCG CTTTTCATCA GAGCATGCCG GCCAAGGCCT ATCAATACGC TATCCCCTAC GCCCTGTATA AGGAATTGGG GATCCGCCGC TACGGGTTCC ACGGTACCTC CCATCGCTAT GTGACGAAAA AGGCCGCCGC ATTGCTCGGG AAAAAGGAAG ACGAGGTCAA TCTGATTACC GTCCACCTGG GCAACGGCAG TTCCATGAGC GCCATCAAAA ACGGCAAATG CGTGGACACC TCTCTGGGCA TGACTCCCTT GGCCGGCTTG GTCATGGGAA CCCGCTGCGG GGACATCGAC CCCGCGGTCC ATGCCTTTTT AGCCAAGCAA AAAGGCATGA GCATCGAGGA AATCGATACC CTGTTCAATA AAGAAAGCGG ACTCAAGGGC ATCTGCGGCA TGAACGACAT GCGCGATATC CATACGGCCC GGGAAAAGGG CGACGCCCAG GCCCAACTTG CCGTGGACAT GCTCACCTAC CGCAATAAGA AATACATCGG CTCTTATCTG GCCGTACTGG GCCGCGTGGA CGCCATTGTC TTTACCGCCG GCATCGGGGA AAACGACTCT GACGTCAGAG CTTTGAGCCT GGAAGGGTTG GAAAACTTCG GGATCGAAGT CGATCAGACC AAAAACGGTG AACGCAAAAA AGAGGCCCGG TTTATCAATA CCGAGTCCAG CACGGTGAAA GTCATGATCG TGCCCACGGA CGAAGAGTTG GAAATCGCGC AACAGACCAT GGAGATAGTC GGCCAATAG
|
Protein sequence | MKTLVINSGS SSIKYKLFDM ESEAVLAAGV IERIGEESSK LEHKKYPGTE REGKTEQNDR VANHEEGLGK VVALLTDADY GVIRDRAEID AVGHRVVHGG EAFHAPTVID DSTIAAIEAN ASLAPLHNPA NLTGIKVARE MFKDVPQVAI FDTAFHQSMP AKAYQYAIPY ALYKELGIRR YGFHGTSHRY VTKKAAALLG KKEDEVNLIT VHLGNGSSMS AIKNGKCVDT SLGMTPLAGL VMGTRCGDID PAVHAFLAKQ KGMSIEEIDT LFNKESGLKG ICGMNDMRDI HTAREKGDAQ AQLAVDMLTY RNKKYIGSYL AVLGRVDAIV FTAGIGENDS DVRALSLEGL ENFGIEVDQT KNGERKKEAR FINTESSTVK VMIVPTDEEL EIAQQTMEIV GQ
|
| |