| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1025 |
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| Symbol | |
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| ID | 8418848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1207370 |
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| End bp | 1208731 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037595 |
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| Product | protein of unknown function DUF107 |
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| Protein accession | YP_003197891 |
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| Protein GI | 258405149 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1030] Membrane-bound serine protease (ClpP class) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCTC CATCATGCCA CCAGGTCTGG TTCCGCCACG GTAGTGCATG CCTTCTCGGT
CTGCTGATCC TGTTCTTGGC AGGCACGGCA GGTCACAGCC AATCCTCTCC GAATCTTCGC
GCTCTTTCTG TGCGCCTGGA GGGGGCCATT ACCCCGGCCC AGGCCGACCT GCTTGCCGAA
TCCCTGCAAA AGGCCAGGGA ACAAAACTTC GACTTTTTCG TGATCGAGTT GGACACCCCA
GGGGGATTGG GAGCGTCCAT GCGCGATATG GTCAAAACGA TTCTCAACGC CCCACTTCCA
GTCTGTATCT GGGTCGGTCC ACGAGGAGCA CGAGCCGCTT CCGCGGGCGT CTTTCTGGTC
GCCTCTGGGC ATATCAATGC CATGAGCCCG CAAACGACCA TTGGAGCGGC CAGTCCGGTC
AGTTTGGGCG GGCAAGATAT GAACTCCACC ATGGGCCAGA AAATCAAGAA CGATTTCCTG
AGCCTCATTC GGGGAATCGC CACTTCCCGT GGGCGCAACG CCGAGTGGTA TGAAAAGGCC
GTGGACGAAG CTGCCACCCT GACGGCCCAG GAGGCCGCGG CACAGGATGT CGTGGACTAC
CTGGCCGACT CCCCAATTGA GGCCCTCGTC AAAGCCGGGG CAGAAGGCTT TACCTTCGAG
GACCGGAGCT ATGCGTTCTC CCAACAGCAG ATTGCGGTCA CGCCGTACAC CCTCCCCTTG
CGCTACCGGT TTCTTTCCTG GCTTCTGCAC CCCCAAATCG CCTATTTTCT GCTTTTGGGC
GGTATCGCTG GCCTGTTTTT TGAACTGAGC CATCCTGGTG CGGTTTTTCC GGGCGTATTC
GGGGCCATTT GTCTGTTACT GGCCATGTAT GCCCTGGCTA TTTTGCCCAC GAATATCGCT
GGAGTGCTCC TTCTTCTGCT GGCCTTTGTC CTTTTTCTCC TGGAGTTGGC GATCACCAGC
TTCGGACTTT TGACCGTGGG CGGGCTGATC TGCCTTCTCC TCGGGTCGAC ACTGCTGTTT
CGCAGTGGTT TCGGCTTCGC CCCCCTGGGG TTGGACGTGG TCTTGCCAAC GGTGCTTTTA
GTGGCGGCCT TTGTCGTAGG TGTGGTGTAT CTGGTGACCA AAATTCAGAT CCGTCCCCGT
CAAAGCGGAG AGCAAGCCAT GATCGGCCTA CGCGGCAAAG TGGTTACTGC TCAGGGCGAC
CGGGGCCGAA TCAAGGTCCG GGGTGAATTG TGGAATGCCA GCAGCGAAAT GGGGCACGCC
CTGCATGAAG GACAAAAAGT CGAAGTCGTA GGCGTCAAAG GCCTTGATCT TGTGGTCCGG
CCGCTCACCG ACCAATCCCC GCTGGAGGTC TCGCATGGGT AA
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| Protein sequence | MSAPSCHQVW FRHGSACLLG LLILFLAGTA GHSQSSPNLR ALSVRLEGAI TPAQADLLAE
SLQKAREQNF DFFVIELDTP GGLGASMRDM VKTILNAPLP VCIWVGPRGA RAASAGVFLV
ASGHINAMSP QTTIGAASPV SLGGQDMNST MGQKIKNDFL SLIRGIATSR GRNAEWYEKA
VDEAATLTAQ EAAAQDVVDY LADSPIEALV KAGAEGFTFE DRSYAFSQQQ IAVTPYTLPL
RYRFLSWLLH PQIAYFLLLG GIAGLFFELS HPGAVFPGVF GAICLLLAMY ALAILPTNIA
GVLLLLLAFV LFLLELAITS FGLLTVGGLI CLLLGSTLLF RSGFGFAPLG LDVVLPTVLL
VAAFVVGVVY LVTKIQIRPR QSGEQAMIGL RGKVVTAQGD RGRIKVRGEL WNASSEMGHA
LHEGQKVEVV GVKGLDLVVR PLTDQSPLEV SHG
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