| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_1014 |
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| Symbol | |
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| ID | 8418837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 1191896 |
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| End bp | 1192747 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 645037584 |
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| Product | 3-methyl-2-oxobutanoatehydroxymethyltransferase |
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| Protein accession | YP_003197880 |
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| Protein GI | 258405138 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
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| TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.425398 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.111438 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTAGCA AGTTGAGCGT CCATACTCTC CAGGGCTTGA AGACCGGCGG GGAAAAGCTG
GCCATGGCCA CGGCCTACGA TTATCCCTCG GCCCAGATCG CAGATGCGGC CGGAATGGAT
ATACTGTTGG TCGGAGATTC TTTGGGTATG GTGGTTCTCG GTTATGAGTC TACTGTCCAG
GTAACGGTGG ACGAAATGCT CCACCATACC AAAGCGGTGG TCCGCGGCAC CAAACGGGCC
TTTGTCATTA CCGACATGCC GTTTTTGTCC TATCAGCCCA CCCCGGAAGT GGCGGTGACC
AATGGTGGGC GATTGTTCAA GGAAGGGGGG TGCGATGCCG TGAAACTGGA AGGGGGGCTC
TCGGTGCTCC CGCAAGTAGA AGCCTTGACC AGGGCGGGGA TTCCAGTCTG CGGCCATATC
GGGTTGACTC CGCAGACAGT GACCCAACTC AGCGGGTACA AGGTCCAGGG ACGTGATGTG
CAGGGGGCCG TTGCTTTGCT TGAAGAGGCC AGAGCCCTTG AGGCCGCAGG GGCGGTTTTC
GTGGTTTTAG AGTGTGTGCC CCAGGAAGTG GCCGCCCGGA TCAGCCGCGA ACTGACGATT
CCCACCATTG GTATCGGCGC GGGCGTGGAT TGTGATGGGC AGGTTCTAGT CTATCACGAC
ATGCTGGGGT TTTTTGACCG CTTTCAGCCC AAATTTGTCA AAGAGTATGT TGATCTGGGG
GAACAGGCCC GCAAAGCGTT GCAGGAATAT CGAGAGGAGG TCAAATCAGG CACCTTTCCT
AAGGCGGAGC ACAGCTACAC CCTCGACGAA AATGTCCGCA CCGCTTTCGA AGGGGAGGTT
TCCGGCGGAT AG
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| Protein sequence | MCSKLSVHTL QGLKTGGEKL AMATAYDYPS AQIADAAGMD ILLVGDSLGM VVLGYESTVQ
VTVDEMLHHT KAVVRGTKRA FVITDMPFLS YQPTPEVAVT NGGRLFKEGG CDAVKLEGGL
SVLPQVEALT RAGIPVCGHI GLTPQTVTQL SGYKVQGRDV QGAVALLEEA RALEAAGAVF
VVLECVPQEV AARISRELTI PTIGIGAGVD CDGQVLVYHD MLGFFDRFQP KFVKEYVDLG
EQARKALQEY REEVKSGTFP KAEHSYTLDE NVRTAFEGEV SGG
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