Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0991 |
Symbol | |
ID | 8418813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 1165870 |
End bp | 1166844 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 645037560 |
Product | Sec-independent protein translocase, TatC subunit |
Protein accession | YP_003197857 |
Protein GI | 258405115 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.0395989 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000851053 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGCGAAT CAGCGGCGGA AACCGCCACC CAGCAGGAGA CGGCCGATGA AGGCCGCATG GGGCTGATCG ATCACCTCAA CGACTTGCGC AAAAGTATTG TCCGTTCGGT TGTGGCTGCG TTGGTGGGCA TGGTCGCCTG CTATGCGTTC GCCCAAAAGC TTTTTGATTA TCTGATGCTC CCCTTGTACA AGGCCCTGCC CGAAGGGAGT ACGCTGATCT ACACCGCCCC CCACGAAGCC TTTTTTACCT ATATCAAGGT CGCCTTTGTG GCTGGGCTCT TTTTGACCAG CCCGTTCATC TTTTACCAGT TCTGGTCCTT TGTCGCCCCC GGTCTGTACA AGCATGAGCG CAAGTGGCTC ATCCCTATCG CCTTTTTCTC AGCGGCCTTT TTCTGCACCG GAGCCATTTT CGGCTACTCC ATCGTTTTCC CCTGGGGCTA TAAATTTTTC ATGGGTTTTG CCGAGGACCT CATTCGGCCC ATGTTGACCA TGCGCGAGGC CTTCTCGTTT GCCATGCGGC TGCTGATCGC CTTTGGGGTC GTTTTTGAAC TGCCGCTGGT CATCTTTTTC CTTGCCCGAC TGGGACTGGT GAACGCCGCC TGGCTCCGGA AAAAACGCAA ATATGCTATT TTAATAGCTT TCATTCTTTC TGCCTTGTTG ACGCCACCGG ACATGGTTAC CCAGAGCTTC ATGGCCGGCC CTTTGGCGTT GCTCTATGAA CTCAGTATCT GGGTCGCGGC TGTTTTCGGC AAGAAACGGC CGGAAAAAGA AGATGCGGAA GAGGCTGGGG CAAACGCGAA GGCTGAAGAG GCTGATGAAA CAGCTGCCAG CGATCCCGAA GCCTCGTCCG AGGCCCATGA AGAGGAATTG CTCCGGGAGG ATGCCGCCTC TTCGGACGAG CAGGACGATG ACGACGGGGA TGAGGACGCG ACCACTGAGC GCAAGGAGGA CGGGTATGCG CCGGACGACT ATTGA
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Protein sequence | MSESAAETAT QQETADEGRM GLIDHLNDLR KSIVRSVVAA LVGMVACYAF AQKLFDYLML PLYKALPEGS TLIYTAPHEA FFTYIKVAFV AGLFLTSPFI FYQFWSFVAP GLYKHERKWL IPIAFFSAAF FCTGAIFGYS IVFPWGYKFF MGFAEDLIRP MLTMREAFSF AMRLLIAFGV VFELPLVIFF LARLGLVNAA WLRKKRKYAI LIAFILSALL TPPDMVTQSF MAGPLALLYE LSIWVAAVFG KKRPEKEDAE EAGANAKAEE ADETAASDPE ASSEAHEEEL LREDAASSDE QDDDDGDEDA TTERKEDGYA PDDY
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