Gene Dret_0961 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0961 
Symbol 
ID8418781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1133965 
End bp1134963 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content48% 
IMG OID645037528 
Producthypothetical protein 
Protein accessionYP_003197827 
Protein GI258405085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.80867e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value4.1454e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGATACAA AAAATGCATA TGCAGTCATT AAGCGAGCAC GGCAAATTTT GAAATCAGCA 
AAACCACGGC ATGTAGCGCA AAAAACACAC CAGGATTATA TGAACCTAGG GGCGCGAGTT
ATGAACGACA AGAAGTTGCT GAAAGAAGCG CGCACCGCAA ATACATACTA TAAGCGATTA
TCTGCATATA ATTATTGCGT TGATTACAGC ATTAGATCTT TGTTGGCCAA GCAAGATCGA
GAGCAAAAAA CAAAAGCTCA CGGGTGGACG GGCACAGTCA AGCGCCTTGA AAGAGCCATC
CGGGAATATG ACGAAGCCCA AGCTATTAAG GGTGATAAAC CCACAGACTT TGAGCCCAAA
CAATCAAAAC GTAAGCATGT GCGTGGACTT CCACCTCAGT GGACACAGCA GTATTGGGAA
AATGTCGACA AAGGCAACAA ATATGCGCCG GTCATTGCTT TGCTGCTCAT TTCAGGTGTT
CGGCCCGCGG AGCTACAGAA GGGGGTTCAG ATCACATTTC ACGAAAAACA TGTGGTTCTT
TTTGTGACTA TCTGGGGGGC AAAATGCCGA GGTGATGGCT CTTCTGGCCA AAAAGAGCGA
GTTGTCGCTT TTGATTGTGA AGGGTTGCCG CCAGACAGTC CGGAGATGTT TCTTGTCCGT
CATTACCTTG CGCAACCCAA TGCTGCAGAA GATGGCGTCT TTATTCAAGC AAACGCCAAG
GCGCTCTATA ATTATGTATC ACGCCTGAGC CGCAAAATTT GGCCCAGGCG CAAGCATCAC
GTCACCCCCT ACACATTCCG GCATATACTT TCAGCCACCC TCAAAAAATC AGAACGTTTC
GATGACGAGA TGATAGCTAA GGTGCTTGGA CATGCCTCTT GCCGGAGTCA ACTTGAGTAC
GGATCAGTAA GGCAAGGCGG GAGAGGAAGC TCGATCCTGG ATGTGCGGGC CGAAAAAACA
CCACGGCCTC ACAAGAATCC AAACAAAAAT CCTCGGTAG
 
Protein sequence
MDTKNAYAVI KRARQILKSA KPRHVAQKTH QDYMNLGARV MNDKKLLKEA RTANTYYKRL 
SAYNYCVDYS IRSLLAKQDR EQKTKAHGWT GTVKRLERAI REYDEAQAIK GDKPTDFEPK
QSKRKHVRGL PPQWTQQYWE NVDKGNKYAP VIALLLISGV RPAELQKGVQ ITFHEKHVVL
FVTIWGAKCR GDGSSGQKER VVAFDCEGLP PDSPEMFLVR HYLAQPNAAE DGVFIQANAK
ALYNYVSRLS RKIWPRRKHH VTPYTFRHIL SATLKKSERF DDEMIAKVLG HASCRSQLEY
GSVRQGGRGS SILDVRAEKT PRPHKNPNKN PR