Gene Dret_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0960 
Symbol 
ID8418780 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1133181 
End bp1133510 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content47% 
IMG OID645037527 
Producthypothetical protein 
Protein accessionYP_003197826 
Protein GI258405084 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.28243e-12 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value2.95621e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCAAAA AAACAATTCC CTATGAAATC AAAATGAGAG CAATCGGCGA GGTGCTCGCC 
GGGGTTGACC GTTTGACCAC GGTGGCCGAT CGCTACGACA TCAGCCCCAG CCACCTCAGT
CGGCAAGTCA GCAGGATCCG GAGGCAGCAT GAATATGGCA AGCTTGATAG TCAGCAACAA
CCAGACTCGG AACCACCCCA CAAAACTCAA CAGGAATCGT TTCAAGAAAT CTTGAAGGAG
ATGAAGTCAA TAAGTGATCA GCAGCAAGCA TTGTATAAAA AAGTTGAAAA TATTTCTGCT
TGTTGGCTAC AAGCTGCTAC TGGCAAATAA
 
Protein sequence
MPKKTIPYEI KMRAIGEVLA GVDRLTTVAD RYDISPSHLS RQVSRIRRQH EYGKLDSQQQ 
PDSEPPHKTQ QESFQEILKE MKSISDQQQA LYKKVENISA CWLQAATGK