Gene Dret_0958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0958 
Symbol 
ID8418778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1132174 
End bp1132815 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content56% 
IMG OID645037525 
Productprotein of unknown function DUF1121 
Protein accessionYP_003197824 
Protein GI258405082 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.55501e-10 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value3.58592e-10 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGCCAGTG ATCTTTTAGA GCAGACAGTC AATTCCCTGA GGCTCAACAA GTTCAACGTG 
TATACCGTCG AGAGCCCTAA AGAGGCCCGG GACACCATTT TGCGCACGAT CCTGCCGGAA
ATAGGCCCTG GATTGGTGTC CTACGGTGAT TCATTGACCC TTCAGGCAAC AGGTGTGCTC
GATGATCTTC GTTCAATGGC CGGTTCTCAT GGATGGGAAT TTCTTGAGAC GTTCGAAAGG
GGCTTGGCCC CAGAGGGCAT TTTGGAACGA CGCCGTCGCG CACTCCAGGC TGACATCTTT
TTTACCGGCA CCAATGCCCT CACCTCCAAG GGCCAGCTCG TGAACCTGGA CATGATCGGA
AACCGTGTGG GCGGCATTGT CTGGGGGCCA CGGCGGGTCA TTCTGACGAT CGGCACGAAC
AAAATTGTGG AGGGGTTGGA CCAGGCCATG GCCCGAGTAC GACTAATAGC CGCGCCGCAA
AACGCCCAGC GCATTGGTGC TAGCACTCCC TGTGCACAGA CTGGTGAATG CATGGATTGC
AACAGCCCTC ATCGCATTTG CAACGTATGG TCGATCACGG AAAAGAGCTG GCCAGCAGGT
CGGATTTCCG TGGTGCTCAT CAAGGGAGAG TATGGGCTCT AA
 
Protein sequence
MASDLLEQTV NSLRLNKFNV YTVESPKEAR DTILRTILPE IGPGLVSYGD SLTLQATGVL 
DDLRSMAGSH GWEFLETFER GLAPEGILER RRRALQADIF FTGTNALTSK GQLVNLDMIG
NRVGGIVWGP RRVILTIGTN KIVEGLDQAM ARVRLIAAPQ NAQRIGASTP CAQTGECMDC
NSPHRICNVW SITEKSWPAG RISVVLIKGE YGL