| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0948 |
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| Symbol | |
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| ID | 8418768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1121608 |
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| End bp | 1123080 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 645037515 |
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| Product | multicopper oxidase type 3 |
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| Protein accession | YP_003197814 |
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| Protein GI | 258405072 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000126918 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGATCGAA GAGCATTTCT GCAGTTTTTG GGCGCCCTGG GGCTGGTAAC AGCTTCTGGT
TCCTTGTGGC CGATGCAGGC CGGGGCCGCC AAACCCGACC TGGACGTTGA ACTCCAAGCT
ATCCAGGACA GTCTTTCCGT TTTTCCTGGC GAAAAGACCG ACATTTGGCG CTTTGCAGGC
AAAGTCCTCC AGGGCGATCC CAACCAGCTG CAGCAGCTGG AGGAAAGCTG GCTGGGGCCA
ATATTCCGGT TACGAACAGG GCAGCGGGTC CGCATCCGGT TCAAAAACCG CATCCCTCAG
GAATCCATTG TCCACTGGCA CGGGCTGCAC GTTGCTCCGG CAAATGACGG GCATCCCAGG
CTGGCTGTCC TGCCTGGGGA GGAGTATGTC TACGAGTTTA CGGTCACCAA CAGAGCTGGC
ACCTACTGGT ACCATCCCCA CCCCCACGGT TTGACCGGCA CCCAGGTTTA CGGCGGAATG
GCCGGACTTT TCGTGGTCAG CGACGAAGAA GAACAGGCCC TGGGCCTTCC GACAGGCGAC
CGCGACCTCC CCCTGGTGAT TCAGGACCGG ACGTTCAGCC CCACCAACGA CCTCGTCTAC
CTGCGCTCCC CCATGGAACG GATGAACGGA TTTTTGGGCA ACCGGATCAT GATCAACGGG
CAGGCGGACC CCACCTTTGA TGTCCAGGAG GGCCCCTACC GACTCCGGCT GCTCAACGGT
TCGAACTCCA GGATCTACCG CCTGGCCTGG AGCGACGGCA GGAACCTGGA AATCATCGCC
ACAGACGGCG GATTGCTCGA AAGCCCGTGG TCTGTTCCGG ATATCATGCT CGGACCAGGT
GAACGTGTGG ATCTCTGGGT CGATTTCGCA GGATCGTCCC AGGAGACGCC GATTGCTCTG
CAGAGTCTGC CCTTTACTCC CGGCAGCGGC CACATGGGGA TGATGTCCAG CCGGGTGAGT
CCACCTCTTG GCGCTGGTTT CGAACTGGCC CGTTTTCAGG TCCGCCGAAC CGGCCGGACT
CGGACTTCTC CTCCGCAACG CCTCGCTCGC CTCGAACGCC TGGACCCCGC TGAGGCCGTG
AACCGCGACA ATCCCAAACG TTTCTTTTTG ACCATGAACC ATATGCAGCC GACCATCAAT
GGACGAACCT TCGACATGAC GGAAGTGGCC CCTGATGAGA TGGTACGCCT GGGAAGCACT
GAAATCTGGG AATTTATCAA TCAGGGATCC ATGATGGCCA TGCCCCACCC TATGCACATC
CACGGCCTGT CATTCCAGGT TATCGGTCGC TTCGGCGGCC CTGGCTACCG ATTTCTGGAC
CGTGGCTGGA AGGACACCGT CCTGGTCATG CCTGGAGAGC GAGTGGCTGT GATCATGCGT
TTTGCCGATC ACAAGGGGCT CTATCTTTAC CATTGCCACA ATCTGGAACA TGAAGATCTG
GGCATGATGC GCAATTATCT GGTCCGGTCT TGA
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| Protein sequence | MDRRAFLQFL GALGLVTASG SLWPMQAGAA KPDLDVELQA IQDSLSVFPG EKTDIWRFAG
KVLQGDPNQL QQLEESWLGP IFRLRTGQRV RIRFKNRIPQ ESIVHWHGLH VAPANDGHPR
LAVLPGEEYV YEFTVTNRAG TYWYHPHPHG LTGTQVYGGM AGLFVVSDEE EQALGLPTGD
RDLPLVIQDR TFSPTNDLVY LRSPMERMNG FLGNRIMING QADPTFDVQE GPYRLRLLNG
SNSRIYRLAW SDGRNLEIIA TDGGLLESPW SVPDIMLGPG ERVDLWVDFA GSSQETPIAL
QSLPFTPGSG HMGMMSSRVS PPLGAGFELA RFQVRRTGRT RTSPPQRLAR LERLDPAEAV
NRDNPKRFFL TMNHMQPTIN GRTFDMTEVA PDEMVRLGST EIWEFINQGS MMAMPHPMHI
HGLSFQVIGR FGGPGYRFLD RGWKDTVLVM PGERVAVIMR FADHKGLYLY HCHNLEHEDL
GMMRNYLVRS
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