| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0917 |
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| Symbol | |
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| ID | 8418737 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1087148 |
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| End bp | 1088992 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 645037487 |
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| Product | cobalamin synthesis protein P47K |
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| Protein accession | YP_003197786 |
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| Protein GI | 258405044 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0523] Putative GTPases (G3E family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAA ACCTGCAAAA TCTCCTTCCT CCTTGCGCTC TGCAAGAAGA CGGTCCCGCA
GCTGTTGAAC TCATGCGGGC AGTCATGATC CGCTCCAATT TCGTCCCCAA CGCACGGCAC
AAATTGGGGT GGCGCGGAGT GCAGGAAATC GTTGACGGCA GAATAGAAAC GCTGTCCTTC
ACTTCCAAAA TCCAGAGCAT GCCCGGGGTC TATGGCCTGC GACTCCTTGA GAGCACGCCT
CGCCGGGCCG GGTTCGAACT CTGTTATTTT CCGTCCCCTG AAGACCCGCT GATTGAAAAC
GTCTGCGTCC AGGCCGGCAT AGCCGCGCTT GATCAGAAAT TTCCAGACCG GGTGCGTGAA
TTCTCCGCAT ATCCTGATCT GTGCACACTT TTTCAGATCG GCCGGATCCA CATTGATCTC
GATATCGAGG CCAACACTCA ATATCTGAGC CTGGAAGCAC TGGACACCAA TATCATACTC
TCCGAAGACG GACTTTGGAT TGACACCCCT GAAGGACCAA TCCAGGCCGT GCCCCCTGGA
GAACGAGATC AATCCTTTCC CGCTTATGAA ACCGCATTGC GGTTTTTCCG GGTCCTCGCT
TCATCGTTGT GCTATACCCA GGAAATGGAT GTCGATCTCC TTTTGGAACA AAACGCCGCG
GGCCATGTCC TTGTCTACCG TGACGAAGGT AAACTGACAA AAACACCAAG TTCTGCCTGC
AAACGGAAAA CCCTGACCCT GGGACTCAAC AGCAAGGGAG CACCTCCCCC TGGCCATGCC
GACAACGGGT CCATCCAGAC ACTTTGGAGG CTTGCGGAAA AAATCCCGCC GCAGTTCAGC
GAAGAGCCGT GGTGGGCACT CGCCTCCCCG GGAAACGCCA ACAGCCGACT CAAACGCCAA
ATCGATGCGA GCCTACCCAA ACTCATTGTC CTCACCGGCT TTCTTGGAGC GGGCAAGACG
ACCTTTTTGG ACCGGTTCAT CGAGACCCAG ACCGGGGAGA ATTCTTTTGT GGCGGTGATC
CAAAATGAAA TCGGGGAGAA AGGACTGGAC GGCAAACTCT TACATCAAAA CTACGCGGTC
ACGGAAATCG ATGAAGGGTG CGTCTGCTGC ACGCTGGCGG GAAATTTGCG GGCTGCTGCA
GAAGAAATCA TGCGCGAGCA CGACCCCGAT TGTATCGTTC TGGAAACAAC CGGACTGGCC
AACCCCGCAA ACATCCTCCA GGAAATCAAC GAACTGGAAG ATATACTGGA ATTCGGTTCG
ATCACTTGTG TGGTCGACGC TGTTGGCGGA GTACAGGCCT TGGAAAAATT TGAAATCGCC
CGGAGCCAGG TCCGTCTGGC CGATGTCGTC CTTCTGAATA AAAGCGATCT GGTCGCCGCC
CCCATCCTGG GCGAACTCGA AGACACCATC CACAGCCTGA ACAGCATGGC TGTCACCCAC
AGGACGACGC ACGGCAATAT TCACCCCGGT CTCTTGTACG GAGTGAATAT GCACACCCAG
GCGACCAGGG CCAAGAACAT CGGTACCCAG GCCCACTGCC AGGCAAACCA CCTCCACGAT
CATGTGGAAA ACACCCTGCT GCACCCCGCT GGCCCGCTGA AAACAGACGA GTTGATCCGC
GGGATAGAAA AGCGTCAGGA CCGGATTTTG CGGGTCAAAG GGGTTGTCGA ACTTGAAGAG
GAACTCGGCC CGGTTATTTT CCAATATTCT CCGGGCACCT ACTCCATAGA GACCGCGCCT
CAGGAACTCA AGGACGAAAG GTACCTCGTG GTGATTGGCA AGCACACTGC GGGCATGGAA
TTGGAGAGCT TGCTCAGCAG GGGCTGCAAC CCGGCATTTG CATAA
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| Protein sequence | MPKNLQNLLP PCALQEDGPA AVELMRAVMI RSNFVPNARH KLGWRGVQEI VDGRIETLSF
TSKIQSMPGV YGLRLLESTP RRAGFELCYF PSPEDPLIEN VCVQAGIAAL DQKFPDRVRE
FSAYPDLCTL FQIGRIHIDL DIEANTQYLS LEALDTNIIL SEDGLWIDTP EGPIQAVPPG
ERDQSFPAYE TALRFFRVLA SSLCYTQEMD VDLLLEQNAA GHVLVYRDEG KLTKTPSSAC
KRKTLTLGLN SKGAPPPGHA DNGSIQTLWR LAEKIPPQFS EEPWWALASP GNANSRLKRQ
IDASLPKLIV LTGFLGAGKT TFLDRFIETQ TGENSFVAVI QNEIGEKGLD GKLLHQNYAV
TEIDEGCVCC TLAGNLRAAA EEIMREHDPD CIVLETTGLA NPANILQEIN ELEDILEFGS
ITCVVDAVGG VQALEKFEIA RSQVRLADVV LLNKSDLVAA PILGELEDTI HSLNSMAVTH
RTTHGNIHPG LLYGVNMHTQ ATRAKNIGTQ AHCQANHLHD HVENTLLHPA GPLKTDELIR
GIEKRQDRIL RVKGVVELEE ELGPVIFQYS PGTYSIETAP QELKDERYLV VIGKHTAGME
LESLLSRGCN PAFA
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