Gene Dret_0903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0903 
Symbol 
ID8418723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1069723 
End bp1070619 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content60% 
IMG OID645037473 
Productzinc transporter ZupT 
Protein accessionYP_003197772 
Protein GI258405030 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0428] Predicted divalent heavy-metal cations transporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.373127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACACC CCATCTGGTT CGCCCTCGGA CTGACGCTGT TTGCCGGTAT GGCTACCGGG 
ATCGGTAGCG GCATCGCGTT TTTCGCTAAA CAGACCAGTC ACCGTTTCCT CTCCGTGGCC
ACCGGATTTT CGGCTGGCGT CATGCTCTAC GTCTCGTTTG TGGAGATCTT CATCAAGGGC
CAGGAAGCCA TGACTGCAGC CTATGGGGCC TATTGGGGCC ATTGGGTCAA TGTAGGGTCG
TTTTTCGGAG GCATTGTCCT GATTGGCTTG ATCGATACCC TCATCCCTTC GGCCGAAAAC
CCCCACGAAA CCCACTCGGA ATTGGAAACG GCCCCCCTGC ACGACCCCAA CGCGCCAGTG
CCCAATTTTG CCGGCCTGGA TTGCCGGCCT GCCGAACCGG GTGTCCACGA CCATCTCCAC
AACCACAAAC TGATGCGCAT GGGGCTCTTT ACCGCCTTGG CCATCGCCAT CCACAATTTT
CCAGAGGGAT TGGCCACATT TCTGGCTGCG CTGGAGGATC CCAGCATCGG CGTGGCCATT
GCCATGGCCG TGGCCCTGCA CAATATCCCT GAGGGCATCA GCGTCTCCGT GCCCATTTTC
TACGCCACCG GCAAACGGAG AAAGGCTTTC GCCCTCTCAG CCCTAAGCGG CATGGCTGAG
CCCATCGGTG CCGGTCTCGC CTATGTCCTG CTCCGTCTTT TCGTCGGCGA TGAATCCGGC
CTTATTCCAC CGCAGGTCAT GGGTGTGCTC TTCGGGGGCG TGGCGGGTAT CATGGTCTAT
ATCAGTCTCG ACGAGCTGTT GCCCACCAGC CAGGCTTACG GCAAAGGGCA CGACAGCCTG
TTCGGGCTCA TCGCCGGCAT GGCTGTCATG GCCCTGAGCC TTTTGCTCAT GCGCTGA
 
Protein sequence
MEHPIWFALG LTLFAGMATG IGSGIAFFAK QTSHRFLSVA TGFSAGVMLY VSFVEIFIKG 
QEAMTAAYGA YWGHWVNVGS FFGGIVLIGL IDTLIPSAEN PHETHSELET APLHDPNAPV
PNFAGLDCRP AEPGVHDHLH NHKLMRMGLF TALAIAIHNF PEGLATFLAA LEDPSIGVAI
AMAVALHNIP EGISVSVPIF YATGKRRKAF ALSALSGMAE PIGAGLAYVL LRLFVGDESG
LIPPQVMGVL FGGVAGIMVY ISLDELLPTS QAYGKGHDSL FGLIAGMAVM ALSLLLMR