Gene Dret_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0896 
Symbol 
ID8418716 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1062732 
End bp1063286 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content61% 
IMG OID645037466 
Product4Fe-4S ferredoxin iron-sulfur binding domain protein 
Protein accessionYP_003197765 
Protein GI258405023 
COG category[C] Energy production and conversion 
COG ID[COG0437] Fe-S-cluster-containing hydrogenase components 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.629112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACAAC TCAGTTTGAT GATAGATCTG GACCGGTGTA TCGGGTGCAA GACCTGTATT 
GTGGCCTGCC GCAATGCCCA CAATCTGGTC GATCATGCCA CGGCCCTGCC GGGGAGCCTG
GCTTCCTATC TCCGGGTCGA GAGCCGGCGG GAGGGAACCT ACCCCGACCT GCGGGTCCGC
TCCTGGGTCG TGCCCTGCCA ACATTGCAAA AACGCCCCGT GCATCAAGGC TTGCAAAGAG
GAGGCGATCA GCAAAGATGT GCAGACCGGA ATCGTGCGCA TCGATCCGGA CAAGTGCGCC
GGGAGCCGGG CCTGCCTGGA GGCGTGCCCC TACGGGGTGA TCCAGTTCGA TGCTGCAACG
AACAAGGCGC ACAAATGTGA TCTCTGCTTT GAGCGTATCC ACCGCGGCGA ACAGCCGGTC
TGCGCCGAGG TCTGCCTGAC CGGGGCGATC GAGTTCGGTG AAAAAGAGAT TCTCGCGATG
CGGGCCGAGG CCTCGGGCAA GCAGGTGTTC AAGAAACTCA GCGCCCAGAA TATGCTCTAT
GTGGGGGCGC CCTAA
 
Protein sequence
MKQLSLMIDL DRCIGCKTCI VACRNAHNLV DHATALPGSL ASYLRVESRR EGTYPDLRVR 
SWVVPCQHCK NAPCIKACKE EAISKDVQTG IVRIDPDKCA GSRACLEACP YGVIQFDAAT
NKAHKCDLCF ERIHRGEQPV CAEVCLTGAI EFGEKEILAM RAEASGKQVF KKLSAQNMLY
VGAP