| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0892 |
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| Symbol | |
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| ID | 8418712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 1056191 |
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| End bp | 1057312 |
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| Gene Length | 1122 bp |
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| Protein Length | 373 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 645037462 |
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| Product | A/G-specific adenine glycosylase |
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| Protein accession | YP_003197761 |
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| Protein GI | 258405019 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1194] A/G-specific DNA glycosylase |
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| TIGRFAM ID | [TIGR00586] mutator mutT protein
[TIGR01084] A/G-specific adenine glycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.243357 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCAAC TCCCCGACAC AAGCCGCGAG TTTCAAGACC AACTCCTGGA GTGGTTCGCT
GCCCACCAGC GGGATCTGCC CTGGCGTCGC ACCTATGCCC CGTATGCGGT CTGGATATCG
GAGATCATGC TCCAGCAGAC CCAGATGGAC CGCGCCGTGG GCTATTTCCA GCGCTGGATG
GAGCGCTTTC CGGACATTGC CAGCGTGGCC GCGGCCAGCG AAGACGAAAT CCTGACCTAT
TGGGAAGGCC TCGGCTACTA CAGTCGGGCC CGGAATATCC ACAAGGCCGC GCAGACCCTG
GTCCGCGAGC ACGACGGCGT CTTCCCCCGC ACCCGAAAAG CCTTGCTGGC CCTGCCGGGA
ATCGGCCCCT ATACTGCCGG GGCCATCCTC AGCATCGGTT TCGGGCAGGA CGAGCCGGCG
GTGGACGCCA ATGTGGAACG CATCCTGGCC CGCCTGACAG ATATCGACAC CCCGGTCAAA
ACCAAACCGG CCCAGGAGGC CATCCACACT GCGGCCCGAG ACTTACTCCC CCCTGGACGC
TGCCGGGAAT TCAACCAGGC CCTCATGGAA CTTGGTGCTC TGGTCTGTCG GGCGCGCGCC
CCGCGATGCC CGAACTGTCC TGTGGCCCCG TTTTGCGAGG CCCGCCGGCT GGGCATCACC
GATCAGCGGC CGGTACCCGG CAAACGCCCG GTTATCACCC CCCTGGAAAT CGTGACTGGC
GTCCTGGTCC ACCGGGGACG GCTTTTTATC CAGAAACGGC GCAGCGATTC GGTCTGGGCC
AATCTCTGGG AGTTCCCTGG GGGGCGGGTT GAACCCGAGG AAACGCCGGA AAACGCCGTG
GTGCGAGAAT TTTGGGAAGA AACCGAATTC GCGGTCAAAG CGGCAGACAA AATCACCGTC
ATCCGCCACG GGTACACGAC CTATAAAGTC ACCTTGCACT GTTTTTTCTG CACGCTGGAA
AACAGCAGCA ATTCCCTGCC CGAACCGGTT CTGCACGCCG CCCAAGAGGC GCTCTGGACG
CCCCCGGATC GGCTGCACGA ATTCGCATTT CCCGCCGCTC ACCGTAAGCT CATCGACACC
ATCCAGCGCG ACCTGCGTTT GCAGACCCTG CTTGGCGGGT AA
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| Protein sequence | MPQLPDTSRE FQDQLLEWFA AHQRDLPWRR TYAPYAVWIS EIMLQQTQMD RAVGYFQRWM
ERFPDIASVA AASEDEILTY WEGLGYYSRA RNIHKAAQTL VREHDGVFPR TRKALLALPG
IGPYTAGAIL SIGFGQDEPA VDANVERILA RLTDIDTPVK TKPAQEAIHT AARDLLPPGR
CREFNQALME LGALVCRARA PRCPNCPVAP FCEARRLGIT DQRPVPGKRP VITPLEIVTG
VLVHRGRLFI QKRRSDSVWA NLWEFPGGRV EPEETPENAV VREFWEETEF AVKAADKITV
IRHGYTTYKV TLHCFFCTLE NSSNSLPEPV LHAAQEALWT PPDRLHEFAF PAAHRKLIDT
IQRDLRLQTL LGG
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