Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0867 |
Symbol | |
ID | 8418686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | - |
Start bp | 1025267 |
End bp | 1025728 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 645037436 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_003197736 |
Protein GI | 258404994 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.87047 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATTTT CCACCCGCAG CCGCTACGGT CTCCATCTCC TGCGCGATAT CGCCATCCAC GCCGAAAGTG GCCCGGTCTC CATTTCCGAG ATCGCGTCGC GGCACAGCAT GTCCCTCAAA TACACAGAAA AAATCATTCG CCAACTCCGC CAAGGCGGTT GGCTCAGCAG CACCCTCGGC GCCAGGGGAG GCTACCAGTT GACCCGCCAA GCCTCAGCCA TGCCCTTGGG CGAGATCGTT CGCTACCTGG AAGACTCCCC TCTGCTCCTC GATTGCCAAA AATTACGCCC CGGATGCCCC CGATGTGGGG TCTGCCTGAC CCGCTCACTT TGGCAAGAGG CCCTGGAGGC CATGTACGCC AAGTTGGACT CCTTCACCCT GGCTGACCTG GTCCGCGACA CCCAGTTGTG TCCTGTACAC GACCCTCCCT CGACGTATTG CTGCGCGCCA CGTCGGCAGT AA
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Protein sequence | MKFSTRSRYG LHLLRDIAIH AESGPVSISE IASRHSMSLK YTEKIIRQLR QGGWLSSTLG ARGGYQLTRQ ASAMPLGEIV RYLEDSPLLL DCQKLRPGCP RCGVCLTRSL WQEALEAMYA KLDSFTLADL VRDTQLCPVH DPPSTYCCAP RRQ
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