Gene Dret_0867 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0867 
Symbol 
ID8418686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp1025267 
End bp1025728 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content61% 
IMG OID645037436 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_003197736 
Protein GI258404994 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.87047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTT CCACCCGCAG CCGCTACGGT CTCCATCTCC TGCGCGATAT CGCCATCCAC 
GCCGAAAGTG GCCCGGTCTC CATTTCCGAG ATCGCGTCGC GGCACAGCAT GTCCCTCAAA
TACACAGAAA AAATCATTCG CCAACTCCGC CAAGGCGGTT GGCTCAGCAG CACCCTCGGC
GCCAGGGGAG GCTACCAGTT GACCCGCCAA GCCTCAGCCA TGCCCTTGGG CGAGATCGTT
CGCTACCTGG AAGACTCCCC TCTGCTCCTC GATTGCCAAA AATTACGCCC CGGATGCCCC
CGATGTGGGG TCTGCCTGAC CCGCTCACTT TGGCAAGAGG CCCTGGAGGC CATGTACGCC
AAGTTGGACT CCTTCACCCT GGCTGACCTG GTCCGCGACA CCCAGTTGTG TCCTGTACAC
GACCCTCCCT CGACGTATTG CTGCGCGCCA CGTCGGCAGT AA
 
Protein sequence
MKFSTRSRYG LHLLRDIAIH AESGPVSISE IASRHSMSLK YTEKIIRQLR QGGWLSSTLG 
ARGGYQLTRQ ASAMPLGEIV RYLEDSPLLL DCQKLRPGCP RCGVCLTRSL WQEALEAMYA
KLDSFTLADL VRDTQLCPVH DPPSTYCCAP RRQ