| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0825 |
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| Symbol | |
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| ID | 8418643 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 976131 |
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| End bp | 977711 |
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| Gene Length | 1581 bp |
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| Protein Length | 526 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 645037393 |
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| Product | response regulator receiver modulated serine phosphatase |
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| Protein accession | YP_003197694 |
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| Protein GI | 258404952 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.126425 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.339318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACATA TTTTGCTTGT TATCGCAGAG AACGGCCTGG CGACGACTTT GCAAGAGGCG
CTGCAGGACC ATTTCGGGGG CGAGGTCCAT GTGGCAGAGT CATTGCAAAC AGCCAGGACC
GCCTTGCAGT GGTGTTCGTA TTCTCTGGTC TTGACCGATC TCCGACTTCC AGACGCGCCC
CATGGTGAGT GCATCGATGC TCTTTTACAG ACAGGCGTTC CGATCATCGT GCTGACCTCT
GATCTTTCCA GCGAGGGCCG TCAGGAATTG CTGGACAAAG GGATTGTCGA CTACATTTTC
AAAGACGAAC CTCAGGTCAT CAGCGACGTC ATTCAGGCCA TTGAGCGCAC TGATAAAAAC
AGGGAGACCG CCATTCTGGT TGTGGACGCC AACCCGGAAT CCCTGGCCAG CATTACCCTT
TGTCTGCAGC GGTACTTGTT CGCAGTTCAG GGGGCCACGA CCGGGACGCA GGCGTTACAA
CTTTTCGATG CCCGCACAGA CGTCAAGGTA GTGATTGTCG AGGCTGATTT GCCGGATATG
GATGGAATGG CCCTGTGCTC CAGATTGCGG AAGCGTAAGG CACGCAACGA GCTTGCGATC
ATAGGGGTCT CCGCGGCCCA GGAAGGGTCC CTTTCGGCGC GTTTTTTGAA AAAGGGCGCC
AATGATTTTT TGACCAAACC TTTTCAGCGT GAAGAACTTT ACGCACGATT GCTCCAAAAT
CTTGATACCT TGGAGGTCAT CGCCAAAAAA GAGCAACTTT TGCGGACGAT CCAGAAAATG
AATCAACGTA TGCAGCGAGA TCTCGAGGCT GCTGCTGAAG TTCAACAACG TTTATTGCCC
TATAGTCTTC CGGAGATACC TGGAATAAAA ACTAATTGGT ATTTCCAACC TTGTGAGCAA
TTAGCTGGGG ACGCATTAGG GGTATTCAAA ATCGATGCGG AGCACCTCGG ATTGTATGTG
CTCGACGTCA GCGGCCATGG TGTCCCTGCG GCTTTGCTGG CCGTATCTGC AGTACAGACG
CTGCAATTGC ATGCCACATC TCCAGAAAGT TCATCAGGAA GCTGTAATTC CATACTTCAT
ACTCCACAAC AAGTCATGGA GTTGTTGGAT AGAGAATTCC CCCTGGAGCG TTTCGATAAA
TTTTTGACTA TTGTTTATGG GGTGCTCAAT ACAAATAGCG GATGTCTTCA GTACAGTGTG
GCCGGACATC CTCCTCCTTT TCTCGTCCAT CGGGACGGAT ATACCGAGGT CTTGGATACC
GGGGGATCTT TTGTCGGCCT GGGCGGGGCG ATTCCCTTTG AGTCGCGCAC TGTATGCCTC
CAGCCCGGGG ACAAGGTGGT TTTCTATTCC GACGGCGTGA CAGAAATGGT TAATGAAAAC
GGGGAAGAAT ACGGCTTGCA ACGTTTGAAG CAAATGCTGG AAACCCACGG CAGGGACTCC
GTAGATGAGT GTATTGAAAC AGTACGGCGC TCTCTTGACG AATTCGGACG GCGGCGCGTT
CCACGCGATG ATATATCGCT GCTTTGTGTT GGCCGGGCGG TCCTGGGGGC CTCTTCAAAG
GCAAGCGGTT CTTTGCGGTA G
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| Protein sequence | MKHILLVIAE NGLATTLQEA LQDHFGGEVH VAESLQTART ALQWCSYSLV LTDLRLPDAP
HGECIDALLQ TGVPIIVLTS DLSSEGRQEL LDKGIVDYIF KDEPQVISDV IQAIERTDKN
RETAILVVDA NPESLASITL CLQRYLFAVQ GATTGTQALQ LFDARTDVKV VIVEADLPDM
DGMALCSRLR KRKARNELAI IGVSAAQEGS LSARFLKKGA NDFLTKPFQR EELYARLLQN
LDTLEVIAKK EQLLRTIQKM NQRMQRDLEA AAEVQQRLLP YSLPEIPGIK TNWYFQPCEQ
LAGDALGVFK IDAEHLGLYV LDVSGHGVPA ALLAVSAVQT LQLHATSPES SSGSCNSILH
TPQQVMELLD REFPLERFDK FLTIVYGVLN TNSGCLQYSV AGHPPPFLVH RDGYTEVLDT
GGSFVGLGGA IPFESRTVCL QPGDKVVFYS DGVTEMVNEN GEEYGLQRLK QMLETHGRDS
VDECIETVRR SLDEFGRRRV PRDDISLLCV GRAVLGASSK ASGSLR
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