Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0818 |
Symbol | |
ID | 8418636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 966115 |
End bp | 967764 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 645037386 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003197687 |
Protein GI | 258404945 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCATA AAGACTGTTT TTCGAGTTTG GACGACTTTA CCGATAATTG GCGTGTGCCC CAATGGACAG GATTTAATTT CGCTTACGAC GTGGTGGACC ATATGGCCCA AACTTCCCCG GAGAAGATCG CGATGGTCCA TGTCGATGAT GCCCACGTCA GACGAGACTA TACGTTTGAA TTTTTTGCCG AAGCATCCAG CCGGCTGGCT CACGCTCTGG TCAAACAGGG ACTCGGTCAA GGGGACCGGG TTATGCTCAT GCTCAACCGC CGCATTGAGT TCTGGCTCGG TATGCTTGCT TTGCACCGCA TTGGAGCTGT GGCTGTGCCG TCGCCGTCCA TGCTGACAAG TAAGGATATC GAGTTCAGGG TCAATTTTGC CGGTATCAAA GGCGTTTTTG CTGAAGACGC TCTGATCGAC AATTTTGAAA CGGTGCGCCC GAAATGCCCG GGGCTGAAAG TCTGTATCCA CACCGGGACC GAGGTCCAGG CTCAGGGCTG GCTTGCCTAT GAGACCCTTG TGGCCGAGGA AGCGACCAAG TTCGAACGTC CAAAGGATGC GGCCGCTGAC AACGATCCCC TGCTGATCTT TTTTTCTTCG GGAACGACGG GGCCGCCGAA AATGGTCGAA CACACCCACC GTTATCCCCT GGGGCATATT GTGACCGGGA TGTATTGGCA TGATCTTGAG CCCGGAGATC TCCATCTGAC CCTGGCCGAT ACAGGGTGGG GGAAAGCAGT CTGGGGGAAA TTTTACGGCC AGTGGATGGC TGGCGCAGCG ATTTTCGTCT ACGATTTCCG GGGAAAATTT GATCCCCACA ATTTGTTGTC CGTGTTGGCG GAGCACAAAG TGACGTCCTT TTGCGCTCCC CCGACTGTTT ACCGATTTCT CGTCCGGCAA GACCTCGGGC CCTATGACCT GTCGGCATTG CGCCATTGCA CAACGGCTGG GGAATTGCTG AATGAAGGGG TTTTTCTGAA ATGGCGGGAG AAGACCGGAC TTCCGATCTA CGAAGGCTAC GGTCAAACTG AGACGTCGCT GCAAATCGCC ACTTTTCCCT TTATGGACCC CAAGCCGGGC TCCATCGGCA AGGCCACCCC GCAATGGGAT GTCGTCCTGC TTGATGAAAG CGGTCAACCG TGCCCCCCGG GCGTTGAAGG CGAGATCTGT ATTCGTATCG CTGATGCAGA ACCGGAGGGA TTGTTCACCG GCTATCTGGA TGAACCGGAA AAAACCCGGG CCGTGAAAAC GAATGGCTAC TACCATACCG GAGACAAGGC CTGGATGGAT GAAGACGGGT ATTTCTGGTT TCTTGGCCGT GTGGATGATC TGATCAAAAG TTCAGGATAC CGCATCGGCC CTTTTGAGGT CGAAAGCGCC CTGATCACCC ACCCTGGTGT CGTGGAGGCC GCCGTAACCG CAGTGCCGGA TGAGATTCGC GGCCAGGCGG TCAAGGCCAC GGTGGTCCTG GCCAAGGGGT ATACGCCATC AGAGGCGTTG ACCAAGGAGT TGCAGGACCA TGTCAAACAG GTCACCGCGC CCTATAAATA TCCCCGTATC ATTTCCTACG TCGATGACTT GCCCAAAACC ATAAGCGGCA AGATCAAGCG GGCTGAGATC CGAGCGCAAG ACGAGCATCA CCAGGTTTGA
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Protein sequence | MLHKDCFSSL DDFTDNWRVP QWTGFNFAYD VVDHMAQTSP EKIAMVHVDD AHVRRDYTFE FFAEASSRLA HALVKQGLGQ GDRVMLMLNR RIEFWLGMLA LHRIGAVAVP SPSMLTSKDI EFRVNFAGIK GVFAEDALID NFETVRPKCP GLKVCIHTGT EVQAQGWLAY ETLVAEEATK FERPKDAAAD NDPLLIFFSS GTTGPPKMVE HTHRYPLGHI VTGMYWHDLE PGDLHLTLAD TGWGKAVWGK FYGQWMAGAA IFVYDFRGKF DPHNLLSVLA EHKVTSFCAP PTVYRFLVRQ DLGPYDLSAL RHCTTAGELL NEGVFLKWRE KTGLPIYEGY GQTETSLQIA TFPFMDPKPG SIGKATPQWD VVLLDESGQP CPPGVEGEIC IRIADAEPEG LFTGYLDEPE KTRAVKTNGY YHTGDKAWMD EDGYFWFLGR VDDLIKSSGY RIGPFEVESA LITHPGVVEA AVTAVPDEIR GQAVKATVVL AKGYTPSEAL TKELQDHVKQ VTAPYKYPRI ISYVDDLPKT ISGKIKRAEI RAQDEHHQV
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