| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0756 |
|---|
| Symbol | |
|---|
| ID | 8418570 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 894509 |
|---|
| End bp | 895123 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 645037321 |
|---|
| Product | cobalamin (vitamin B12) biosynthesis CbiM protein |
|---|
| Protein accession | YP_003197626 |
|---|
| Protein GI | 258404884 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0310] ABC-type Co2+ transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.535261 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.785347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCATATCG CTGAAGGAGT GCTTTCTGCT CCCGTACTGC TCGTCGGAGC GGTTGCCGCC
GCAGGGCTTA CGGGTGTGGG GGTGAAGAAA ACGGACCAGG ACCGTATTCC TGTCGTGGCT
GTCATGGCCG CGGCTTTTTT TATTGCCTCG CTTGTCCATA TCCCGCTCGG CCCGGCCAGT
GTGCATCTCA TCCTGAACGG GCTTATGGGG GCTTTATTGG GATGGGCCTG TGTCCCAGCT
TTGTTGGTGG GACTCGGCCT CCAGGCGGTT TTGTTCCAGT TCGGCGGGTT GACGGTCCTG
GGAGTGAACA CGGTGATCAT GGCCGCTCCT GCGCTTGGTT TGGGACTCGT CTTGCGTCCC
GTCATTCAAG GCCGAGGGGT CGTGGCTGTC GCGGCGTCGT TTTGCGTCGG CATGGGCGGT
GTCATCGGTG CCGGTTGTGT TGCGGCCCTG GCTCTCTACG CCTCGGGTGA AGAGTTTTTG
AGTGCGGCGC AACTGTTAGT CGCGGCCCAT TTGCCGGTGG CTCTCCTGGA AGGAGGGGTG
ACAGCGATTG TCGTTGGATC CTTGAAACGG ATACGCCCGG AGATATTTGC TGCAACTTCG
GAGAGTGGAG TATAG
|
|---|
| Protein sequence | MHIAEGVLSA PVLLVGAVAA AGLTGVGVKK TDQDRIPVVA VMAAAFFIAS LVHIPLGPAS
VHLILNGLMG ALLGWACVPA LLVGLGLQAV LFQFGGLTVL GVNTVIMAAP ALGLGLVLRP
VIQGRGVVAV AASFCVGMGG VIGAGCVAAL ALYASGEEFL SAAQLLVAAH LPVALLEGGV
TAIVVGSLKR IRPEIFAATS ESGV
|
|---|
| |