Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0755 |
Symbol | |
ID | 8418569 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 893635 |
End bp | 894405 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 645037320 |
Product | Nickel transport complex, NikM subunit, transmembrane |
Protein accession | YP_003197625 |
Protein GI | 258404883 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5266] ABC-type Co2+ transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.995415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.824327 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGAAGC GGTGCCTGTG CCTGTCTCTT TTGTTTCTCG TGGTCTTTCC TGCCGGTGCC TGGGCCCATT TCGGGATGGT CATCCCGTCG CAATCCATGG TCGACCAAAA TCATCGTCAA CTCACTGTGG ACTTTTCGTT TTCCCATCCC TTTGAAGGTG TGGGCATGGT TCTGGAGCGC CCTGAGCGGG TCACAATCGT CAAGCAGGGC CAGGTCACCG ATGTGACCTC GGAACTGGTC TCAACGACAA TCATGGACAA AAAGGGGTGG CAGCTCGAGT ATGCTGTTCG CCGTCCGGGG GTCTACACCA TCGGCATGGA GCCCAAGCCG TATTGGGAAC CGGCTGAGGA CTGTTTTATT ATCCACTATA CCAAAACCCT TGTTGCAGCG TATGGGGCGG AGTCCGGATG GGATGCCCCT GCGGGGTATC CGATGGAAAT CGTCCCGTTG ACCCGGCCGT TCGGGTTGTA TGCCGGCAAC GTCTTTCAAG GACAGGTCTT GTACAAGGGA GAGCCGCTGG CCCACGCTGA GGTGGAAGTC GAATATTACA ATCGCGAGGG AGACGCCACA GCCCCGACGC CGTACATGGT CACTCAGGTG GTCAAGGCCG ACGCCAACGG CGTGTTCAGC TATGCCGCTC CCAAGGCGGG ATGGTGGGGC TTCGCCGCTT TGCATACGGC AGATTACACC ATGGAGCACG AGGGTGAAGC CAAGGACGTC GAACTCGGCG GCGTGCTTTG GACGCGTTTT AGCAAGTGGC AGAACCACTA A
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Protein sequence | MLKRCLCLSL LFLVVFPAGA WAHFGMVIPS QSMVDQNHRQ LTVDFSFSHP FEGVGMVLER PERVTIVKQG QVTDVTSELV STTIMDKKGW QLEYAVRRPG VYTIGMEPKP YWEPAEDCFI IHYTKTLVAA YGAESGWDAP AGYPMEIVPL TRPFGLYAGN VFQGQVLYKG EPLAHAEVEV EYYNREGDAT APTPYMVTQV VKADANGVFS YAAPKAGWWG FAALHTADYT MEHEGEAKDV ELGGVLWTRF SKWQNH
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