Gene Dret_0740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0740 
Symbol 
ID8418554 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp871872 
End bp873809 
Gene Length1938 bp 
Protein Length645 aa 
Translation table11 
GC content60% 
IMG OID645037305 
ProductPeptidoglycan glycosyltransferase 
Protein accessionYP_003197610 
Protein GI258404868 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.641793 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAGC GCAGAAAGCA AAGAGATTGG ACCAAGGTCC GGATCGTTCT CGTAGGGATC 
GTGTTCTTCC TGGCCCTGGG AGCGCTTTGG GCGCGAGCCT TTTGGGTGCA GATCTACAAG
GGGCCAGCTC TGGCTGCCCA GGCACGAGAC CAATACTGGA CGGAACAAAC AGTGCGCGGT
CTCCGCGGGG AGATCGTTGA CCGGGAAGGG CGCCTTTTGG CGCAAAGCGT TGCCGCGCAG
TCCGTTTTTG CCCGCCCGCA GAAGATCGCC AAGCCCAAGG AGGTTGCCGC TCACCTGGCG
CCGATCTTGC GGGTCGACAC CGCGAAACTT GAACGGTCTC TGCGCTCCAC CTCTTCATTC
GTCTGGCTGG CACGAAAAAT CGGTGACCCC ATGGCCAAGG CCGTTGCGGA GGCTCAATTG
CCCGGAATTT TTCTGACCGA AGAACAGGAC CGGTATTATC CACAAGGGCA TCTGGCCGGC
CAGATGCTCG GGTTTACTGG TGTTGATAAC AACGGCCTGG AAGGTGTGGA AAAAACCTTT
GAGGACCGCC TCAAAGGACG GTCGCTGAAA ATTCGCATGC AGCGCGACGC GACCGGACGG
CTCCTTGACG GCCAAGGCCT CGATCCAGCC CTTGCCAAGG GACAGGATGT CCGTCTTACC
CTTGATACCT GGCTGCAGGG GGTGGTCGAA GAGTCCCTGT CCAAGGTGGT CAAGAAGTAC
GAGGGGCGCT ATGGCACGAG TCTCGCAATT CATGTTCCCA CCGGCGAGAT TTTGGCCTGG
GCCCAATATC CTTTTTTTAA TCCGAACGAA TTCCAAGGCA GCCGGGCCGC TGTTTGGCGG
AACCGTCCCG CGTTAGATGT TTTTGAGCCG GGATCAACAA TCAAACCCCT TCTCGTGGCC
GCCGCGCTGG AAGAGGGGGT CTGCGCCCCT GCGGATACAT TTTCCTGTGA AAACGGGCGC
TGGCGGCGGT GGGGGCACAC CTTCAAGGAC ACGCACGCGT ACAAAGAACT GACCGTTAGT
GAAATAGTAA AATATTCAAG TAATATAGGT GCTGCAAAGA TTGGGCTGGA CTTGGGCGTC
GCTCGCTATT ATCGCTACCT GCGCCGACTC GGTTTCGGCG AGCCTACCGG CCTGCCCTTG
CCGGGAGAGG GCAGCGGCAT CCTGCCCGAG CCCGGAAAAT GGCGCCAAGT CCGGTTGGCG
ACGAGTTCTT TCGGGCAAGG CATCGGGGTG ACCATGCTCC AACTGGCCCA GGCCTATCTC
TGTCTGGCTA ATGACGGCGT GCGCATCCCG CTTCGTCTGG TTCATTCACC GGAAACTTCC
AGCACTGCTT CCAGACAGGT GTTTTCCCGG TCCACGGCCC GCACCGTTCA AGAAATGATG
CGACAGGTTG TGGAGTCAAA CGGCACCGGC ACTCGGGCTC GTGTGTCCGG CTTGACCGTG
GGCGGCAAAA CCGGCACCTC GCAAAAGGCC TCGCCTCAAG GCGGGTACGG TAACACTTAC
GTGGCGGCCT TTGTCGGCTT TTTCCCGGCC ATTTCCCCTG AATACATGAT CGTTACCCTT
GTCGACGAGC CCCGGCGCAA CCATTACGGC GGGGTGGTTG CAGCGCCAGT GGTCCGGGAA
GTGGCTCAGA AAATGGCCGC CGCCCCCCAC TTCGCTTTGC AATTCAAGAC GAACACCTCG
ACCGAGACCG TTTCCCACAA ATCCACCACC ATTCGTCCGA AACGGCATGT GGCCAAAAAA
GCCGTGCCTC CGGTTCAGCA GGGTGTCATG CCGGATCTGA CCGGAGCCTC ACTGCGCCGG
GCCATGGAAT TGGCGCATGC CTATGGGCAG ATGCCGGTTC TCAAAGGGCA GGGCCAAGTG
GTGGTCAAAC AATACCCAGC GGCGGGACGT CAGGCGAACA CCAAACGGTG GACGCTGTGG
CTCAAGCCCG CTTCATGA
 
Protein sequence
MAQRRKQRDW TKVRIVLVGI VFFLALGALW ARAFWVQIYK GPALAAQARD QYWTEQTVRG 
LRGEIVDREG RLLAQSVAAQ SVFARPQKIA KPKEVAAHLA PILRVDTAKL ERSLRSTSSF
VWLARKIGDP MAKAVAEAQL PGIFLTEEQD RYYPQGHLAG QMLGFTGVDN NGLEGVEKTF
EDRLKGRSLK IRMQRDATGR LLDGQGLDPA LAKGQDVRLT LDTWLQGVVE ESLSKVVKKY
EGRYGTSLAI HVPTGEILAW AQYPFFNPNE FQGSRAAVWR NRPALDVFEP GSTIKPLLVA
AALEEGVCAP ADTFSCENGR WRRWGHTFKD THAYKELTVS EIVKYSSNIG AAKIGLDLGV
ARYYRYLRRL GFGEPTGLPL PGEGSGILPE PGKWRQVRLA TSSFGQGIGV TMLQLAQAYL
CLANDGVRIP LRLVHSPETS STASRQVFSR STARTVQEMM RQVVESNGTG TRARVSGLTV
GGKTGTSQKA SPQGGYGNTY VAAFVGFFPA ISPEYMIVTL VDEPRRNHYG GVVAAPVVRE
VAQKMAAAPH FALQFKTNTS TETVSHKSTT IRPKRHVAKK AVPPVQQGVM PDLTGASLRR
AMELAHAYGQ MPVLKGQGQV VVKQYPAAGR QANTKRWTLW LKPAS