| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0732 |
|---|
| Symbol | |
|---|
| ID | 8418546 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | + |
|---|
| Start bp | 864624 |
|---|
| End bp | 865688 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 645037297 |
|---|
| Product | phosphoribosylaminoimidazole synthetase |
|---|
| Protein accession | YP_003197602 |
|---|
| Protein GI | 258404860 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0150] Phosphoribosylaminoimidazole (AIR) synthetase |
|---|
| TIGRFAM ID | [TIGR00878] phosphoribosylaminoimidazole synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.000206442 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGATC GGAGTCAGGC CTACACCGAG GCCGGAGTGG ATATCCAGGC GGCCAATACA
TTTGTCGACC GGATCAAGGG GCTTGTGGCC CAGACCTATA CCAAAGGGGT CATTTCTGAG
ATCGGGGGGT TTGGTGGCTT GTTCAAACTG AACACCGCGG ACATGGAGGC CCCGGTTTTG
GTGGCGTCCA CGGACGGGGT GGGAACCAAA TTGAAGATGG CCTTCCTGGC GGACAAGCAC
GACACCATTG GCATCGACCT GGTGGCCATG AGCGTCAATG ACATCCTGGT TCAAGGGGCC
AAGCCGCTTT TTTTCCTCGA TTATTTCGCC ACTTCCCAGT TGCGGCCCGA TGTGGCGGAA
CAGGTGGTTT CCGGCATAGC GGAGGGGTGC AAGCAGGCGG GGTGCGCTCT TTTGGGCGGT
GAAACCGCTG AGATGCCCGA CTTCTATGCC CAGGGTGAAT ATGATCTTTC TGGTTTTTGC
GTCGGCTTGG TGGACAATGC CAAAATCGTC GACGGATCGG GGATTGCGGT CGGCGACAAA
TTGATCGGGC TGGCCTCATC CGGGCTGCAT TCCAATGGCT ATTCCCTGGT GCGCAAATTG
ATCAAAGATA CCGGGCTGGA CCTTTCCGCC CCCTTGCCCG GGACCTCGAC GCCGGCCGCA
GAAGTCTTCC TCGAACCTAC GAAAATCTAT GCCCGGACCG TGCGCACCCT GCTTCGTGAT
CTCAAGATCA AAGGCATGGT CCACGTCACT GGTGGTGGCT TCTACGACAA TGTCGATCGC
ATTTTGCCCC GAGGCGTCCG AGCCCAATTC GATTTCGGGA CCTGGGACAT CCCGCCAGTC
TTCCAGTGGC TCAAAAAGGC GGGAGAACTC AGTTGGCCGG AGATGTTGAA CATTTTTAAT
TGTGGTATCG GGATGGTTCT GGTGGTGCCG CGGGAGAGCG CCGACGATGT GCTCTCCAGG
GTCCACGGAC TGGGCGAACA GGCCTGGGTC ATCGGCGATA TCCGCTCCAT GCGGGACAAA
GCCCCGTTGG TGGATGTGAC CTTCGCCCAG CAAACCTGCT CCTGA
|
|---|
| Protein sequence | MADRSQAYTE AGVDIQAANT FVDRIKGLVA QTYTKGVISE IGGFGGLFKL NTADMEAPVL
VASTDGVGTK LKMAFLADKH DTIGIDLVAM SVNDILVQGA KPLFFLDYFA TSQLRPDVAE
QVVSGIAEGC KQAGCALLGG ETAEMPDFYA QGEYDLSGFC VGLVDNAKIV DGSGIAVGDK
LIGLASSGLH SNGYSLVRKL IKDTGLDLSA PLPGTSTPAA EVFLEPTKIY ARTVRTLLRD
LKIKGMVHVT GGGFYDNVDR ILPRGVRAQF DFGTWDIPPV FQWLKKAGEL SWPEMLNIFN
CGIGMVLVVP RESADDVLSR VHGLGEQAWV IGDIRSMRDK APLVDVTFAQ QTCS
|
|---|
| |