Gene Dret_0723 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0723 
Symbol 
ID8418536 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp856277 
End bp856714 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content55% 
IMG OID645037287 
Producthypothetical protein 
Protein accessionYP_003197593 
Protein GI258404851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000173916 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.921653 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTGCA TCCTGCCAAG ACTGATGTCC CACCTTGTTG TACCTGTGGT TGTCCTGGCC 
TTTGTCGCAC TCTTGTCCGG CATGGGCAGC AGTTCGACCA AGATCGTCCG TCAAGTTCCT
GAGCCCGATC GTTCCTTTAC TGTAGTGATT CGAGACGTCG CCGCCCGGAG CTATGAAGTC
GATCATTTTT CCATCCAAGG CGTGACCTAT CTGCCGGCGC AATTGGGCAA GGCCAAGCTG
GGCATCGATT TCAATCGCAT CGCCCGGGTG GACATGCTGG ACCAAGGAGA GGCATTTTCC
GCGCGGATCC GTTTTCAGGA CGGCACCCGT CAGGAAGTCC AGCTTGAGCC GGATATTACC
TTCACCGGTC AAAGCAAATG GGGTCCAATC GAACTGAGCA TTGGAGACAT CTACAGTTTC
GAATTCCAGA CCGAGTAG
 
Protein sequence
MRCILPRLMS HLVVPVVVLA FVALLSGMGS SSTKIVRQVP EPDRSFTVVI RDVAARSYEV 
DHFSIQGVTY LPAQLGKAKL GIDFNRIARV DMLDQGEAFS ARIRFQDGTR QEVQLEPDIT
FTGQSKWGPI ELSIGDIYSF EFQTE