| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0714 |
|---|
| Symbol | |
|---|
| ID | 8418527 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 848830 |
|---|
| End bp | 849513 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 645037278 |
|---|
| Product | CBS domain containing protein |
|---|
| Protein accession | YP_003197584 |
|---|
| Protein GI | 258404842 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0517] FOG: CBS domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.724637 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.522786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGTCG AAAATTGGAT GACCACAAAA GTACACACCG TCGCAGCAGA CGCGACCCTC
ATGGAAGCCT CCAAGACCCT CAAAGACTAC GCCATCCGCC GTTTGCCAGT GGTCGACTCC
CACGGGCGGC TGCTGGGGAT CGTCACTGAC CGGGATATCA AGGAGGCCTC CCCTTCCCGG
GCAACCACCC TCGATATCCA CGAACTGTAC TACCTGCTGT CCGCCATCAG CCTCCAGGAC
ATCATGACCC CCAGTCCAGT GACCGTGCGG GCCAGGGACA CTGTCGGCCG CGCGGCCATT
CTCATGCGCC GCCACACAAT TGAGGGGCTC CCTGTCGTGG ACGATGACAA CACCGTGGTC
GGCATCATCA CCGAAAGCGA TATATTCGAT GTTTTGACCA CCATCACCGG CGCTCGCCAA
CCAGGCATCC AATTCGGGGT CACCCTTCCG ACCACCACCG GCTCCCTCCA GGCGGTCCTC
GACCTTCTCC GGGAGCACGG GGCACGAGTG ACGAGCCTGC TGACCGCCGC CGACCCCGCC
ACACCGGAAA CCCGGCAGGT CTATATTCGC ATCGCCCTGC TCCCGCTCAA GGAGCAGACC
GTGTTGCGAG AGACCCTGGC ACGCAGAACC GCATTGTCGT TCTGGGTGGA GGACGATCTG
CCGCCTGCGC CCAAAGAACC CTGA
|
|---|
| Protein sequence | MLVENWMTTK VHTVAADATL MEASKTLKDY AIRRLPVVDS HGRLLGIVTD RDIKEASPSR
ATTLDIHELY YLLSAISLQD IMTPSPVTVR ARDTVGRAAI LMRRHTIEGL PVVDDDNTVV
GIITESDIFD VLTTITGARQ PGIQFGVTLP TTTGSLQAVL DLLREHGARV TSLLTAADPA
TPETRQVYIR IALLPLKEQT VLRETLARRT ALSFWVEDDL PPAPKEP
|
|---|
| |