Gene Dret_0696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0696 
Symbol 
ID8418509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp829408 
End bp830730 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content54% 
IMG OID645037260 
Productlysine 2,3-aminomutase YodO family protein 
Protein accessionYP_003197566 
Protein GI258404824 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value4.15374e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0401463 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT ATAGCGAACA ACAGCAAGAA ATTGCAGAAA AAATCTCTCC AACAGCTACA 
AAATCAAACT GGACGGACTG GAAATGGCAG TTACGGCATT CCATATCAGA CCTGGCGACA
GTTGAAAAAC TTTTAGATAT TGAATTTGAT CCTGAAAAAC GGAAGCAATA CGCCAAGACA
ATGGAAATAT TTCCAATGTC TGTGACCCCG TATTACCTTT CGCTCATAGA TACAGAAGAC
TATGAAAATG ATCCAGTTTT CAAACAGGCC ATACCCTTAC CCGATGAGTT GGATATTGCC
GTTCACGACA TGAAAGATCC TCTTTCCGAA GATGAAGACA GCCCTGCTCC AGGTATTACG
CACAGATACC CCGATCGGGT CCTCTTTCAT GTCAGCAATA CCTGTTCCAT GTATTGCCGC
CATTGTACGC GGAAACGCAA GGTCGGCGAC TCGGATTTCG TGCCCTGTCG CGACGACCTC
CAGGCCGGGC TGGACTATAT CCGGAATACC CCGCAGGTCC GGGACGTCCT GCTCTCCGGC
GGTGACCCGT TTATGCTCCC GGACCATCAG ATCGACTGGT TGCTGGGGCA GCTGCGTTCC
ATTGAGCATG TCGAGGTCAT CCGCATCGGA TCCCGCATGC CGGTGGTCCT GCCTTACAGA
ATCACGGACA ATCTGGTCAG CATCCTCAAA AAACACCACC CCTTGTGGCT GAACACCCAC
TTCAACCATC CTCGGGAATT GACCCAGTCC TCACGAAAGG CACTGGCCAA ACTCGCTGAC
GCCGGCATCC CCTTGGGCAA CCAGACCGTT CTCCTGGCCG GGGTCAACGA TTGCCCGCGC
CTGATGAAGA CCCTGATCCA CAAGCTGGTC CAGAACCGGG TTCGCCCCTA TTACCTCTAC
CAATGCGATC TCTCCGAGGG GTTGACCCAC TTTCGCACGC CGGTGGGCAA GGGCATCGAG
ATCATCGAGA GCCTCATTGG GCACACCAGC GGGTTTGCCG TGCCGACCTA CGTCATTGAC
GCCCCGGGCG GCGGCGGCAA GATCCCGGTC ATGCCCAACT ACATCGTCTC CTGGGGCACG
AACAAGGTCA TCCTGCGTAA CTACGAAGGG GTCATCACCA CCTATACAGA GCCGGATTGC
TATCAGGTCA CCTATTGCGA CCGGGATTGC GACAACTGCA ATCTGACCCT GAAACTCTCC
GACGCTGAGG AGTACCGGGC GATCGGTATT GAAAAACTCC TTTCCGACTG GGATGAGACC
TGCAGTTTGA CGCCCCAGGA CACGGAACGG CTGGAGCGGA GGGACGACAA TGGCGACGAC
TGA
 
Protein sequence
MKIYSEQQQE IAEKISPTAT KSNWTDWKWQ LRHSISDLAT VEKLLDIEFD PEKRKQYAKT 
MEIFPMSVTP YYLSLIDTED YENDPVFKQA IPLPDELDIA VHDMKDPLSE DEDSPAPGIT
HRYPDRVLFH VSNTCSMYCR HCTRKRKVGD SDFVPCRDDL QAGLDYIRNT PQVRDVLLSG
GDPFMLPDHQ IDWLLGQLRS IEHVEVIRIG SRMPVVLPYR ITDNLVSILK KHHPLWLNTH
FNHPRELTQS SRKALAKLAD AGIPLGNQTV LLAGVNDCPR LMKTLIHKLV QNRVRPYYLY
QCDLSEGLTH FRTPVGKGIE IIESLIGHTS GFAVPTYVID APGGGGKIPV MPNYIVSWGT
NKVILRNYEG VITTYTEPDC YQVTYCDRDC DNCNLTLKLS DAEEYRAIGI EKLLSDWDET
CSLTPQDTER LERRDDNGDD