| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0696 |
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| Symbol | |
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| ID | 8418509 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 829408 |
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| End bp | 830730 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037260 |
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| Product | lysine 2,3-aminomutase YodO family protein |
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| Protein accession | YP_003197566 |
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| Protein GI | 258404824 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1509] Lysine 2,3-aminomutase |
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| TIGRFAM ID | [TIGR00238] KamA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000415374 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.0401463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT ATAGCGAACA ACAGCAAGAA ATTGCAGAAA AAATCTCTCC AACAGCTACA
AAATCAAACT GGACGGACTG GAAATGGCAG TTACGGCATT CCATATCAGA CCTGGCGACA
GTTGAAAAAC TTTTAGATAT TGAATTTGAT CCTGAAAAAC GGAAGCAATA CGCCAAGACA
ATGGAAATAT TTCCAATGTC TGTGACCCCG TATTACCTTT CGCTCATAGA TACAGAAGAC
TATGAAAATG ATCCAGTTTT CAAACAGGCC ATACCCTTAC CCGATGAGTT GGATATTGCC
GTTCACGACA TGAAAGATCC TCTTTCCGAA GATGAAGACA GCCCTGCTCC AGGTATTACG
CACAGATACC CCGATCGGGT CCTCTTTCAT GTCAGCAATA CCTGTTCCAT GTATTGCCGC
CATTGTACGC GGAAACGCAA GGTCGGCGAC TCGGATTTCG TGCCCTGTCG CGACGACCTC
CAGGCCGGGC TGGACTATAT CCGGAATACC CCGCAGGTCC GGGACGTCCT GCTCTCCGGC
GGTGACCCGT TTATGCTCCC GGACCATCAG ATCGACTGGT TGCTGGGGCA GCTGCGTTCC
ATTGAGCATG TCGAGGTCAT CCGCATCGGA TCCCGCATGC CGGTGGTCCT GCCTTACAGA
ATCACGGACA ATCTGGTCAG CATCCTCAAA AAACACCACC CCTTGTGGCT GAACACCCAC
TTCAACCATC CTCGGGAATT GACCCAGTCC TCACGAAAGG CACTGGCCAA ACTCGCTGAC
GCCGGCATCC CCTTGGGCAA CCAGACCGTT CTCCTGGCCG GGGTCAACGA TTGCCCGCGC
CTGATGAAGA CCCTGATCCA CAAGCTGGTC CAGAACCGGG TTCGCCCCTA TTACCTCTAC
CAATGCGATC TCTCCGAGGG GTTGACCCAC TTTCGCACGC CGGTGGGCAA GGGCATCGAG
ATCATCGAGA GCCTCATTGG GCACACCAGC GGGTTTGCCG TGCCGACCTA CGTCATTGAC
GCCCCGGGCG GCGGCGGCAA GATCCCGGTC ATGCCCAACT ACATCGTCTC CTGGGGCACG
AACAAGGTCA TCCTGCGTAA CTACGAAGGG GTCATCACCA CCTATACAGA GCCGGATTGC
TATCAGGTCA CCTATTGCGA CCGGGATTGC GACAACTGCA ATCTGACCCT GAAACTCTCC
GACGCTGAGG AGTACCGGGC GATCGGTATT GAAAAACTCC TTTCCGACTG GGATGAGACC
TGCAGTTTGA CGCCCCAGGA CACGGAACGG CTGGAGCGGA GGGACGACAA TGGCGACGAC
TGA
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| Protein sequence | MKIYSEQQQE IAEKISPTAT KSNWTDWKWQ LRHSISDLAT VEKLLDIEFD PEKRKQYAKT
MEIFPMSVTP YYLSLIDTED YENDPVFKQA IPLPDELDIA VHDMKDPLSE DEDSPAPGIT
HRYPDRVLFH VSNTCSMYCR HCTRKRKVGD SDFVPCRDDL QAGLDYIRNT PQVRDVLLSG
GDPFMLPDHQ IDWLLGQLRS IEHVEVIRIG SRMPVVLPYR ITDNLVSILK KHHPLWLNTH
FNHPRELTQS SRKALAKLAD AGIPLGNQTV LLAGVNDCPR LMKTLIHKLV QNRVRPYYLY
QCDLSEGLTH FRTPVGKGIE IIESLIGHTS GFAVPTYVID APGGGGKIPV MPNYIVSWGT
NKVILRNYEG VITTYTEPDC YQVTYCDRDC DNCNLTLKLS DAEEYRAIGI EKLLSDWDET
CSLTPQDTER LERRDDNGDD
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