Gene Dret_0655 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0655 
Symbol 
ID8418467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp781806 
End bp782117 
Gene Length312 bp 
Protein Length103 aa 
Translation table11 
GC content54% 
IMG OID645037218 
Productflagellar hook-basal body complex subunit FliE 
Protein accessionYP_003197525 
Protein GI258404783 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1677] Flagellar hook-basal body protein 
TIGRFAM ID[TIGR00205] flagellar hook-basal body complex protein FliE 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.642815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTAA TCGATCCCAG CCTCGCGGCC GGAGCGGCCA ACTTTCTGGA ACAAAGCGGC 
GCGGCCAACG CTGGCGGACA ACAGACTCCG GTGGAGTCGT TTCGCGATAC CTTATTGGAG
GCGGTCCAGG AAGTAGATAG CCAGAAGAAA ACTGCCAATA CGGCTATTTT GGATAGCACC
ACAGGCGGAG GGACATCTAT ACACGAAACC ATGGTGGCCA TGGAGAAGGC GGGCACGTCT
ATGAAACTCA TGGTTCAGGT TCGTAACAAA GCTATGGACG CCTATAAGGA AATCATGCGC
ATGCAAGTCT AG
 
Protein sequence
MPVIDPSLAA GAANFLEQSG AANAGGQQTP VESFRDTLLE AVQEVDSQKK TANTAILDST 
TGGGTSIHET MVAMEKAGTS MKLMVQVRNK AMDAYKEIMR MQV