| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0637 |
|---|
| Symbol | |
|---|
| ID | 8418449 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfohalobium retbaense DSM 5692 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013223 |
|---|
| Strand | - |
|---|
| Start bp | 762973 |
|---|
| End bp | 763800 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 645037202 |
|---|
| Product | IstB domain protein ATP-binding protein |
|---|
| Protein accession | YP_003197509 |
|---|
| Protein GI | 258404767 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1484] DNA replication protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0077207 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCCCA AACCAGACAT AACCCCTTTA CTCAAAAAAC TGCGCCTTTC CGGTATGTTG
GACTCACTGG AGGTCCGGAA TAAACAGGCG ATTTCAGAAA AGATGCCCTA TACCGAGTTC
CTGTCGCTGC TTTTGAGTGA CGAAGTCGCC CGCCGGGACC AGAAGAAGTT CACCTCCCGG
ATGCGCAAGG CGGGCTTTAA AAGCAGTAAG ACATTGGAAG AATTCGATTT TGACTTCAAC
CCCAAGATCG ACAGAAACCA ACTCTACGAC TTGGCCACCT GTCAGTTCAT CCATGAAAAG
GCCTGCGTGC TCATGACAGG CCCCTGTGGT ACCGGCAAGA GCCATATAGC CCAGGCTCTG
GGCCACTACG CCATACGACG GGGCTTTGAT GTGCGCTTCA TCACCCAGAC CAAGCTGCTG
TCCACTCTGC ACGGCGCCAG GGCCACGCAG ACGTATGCCA AAAAGTTCAA GGCCCTGGCA
CAGGTCCCGC TCCTGGTTAT CGACGATTTT GGGCTCAAGC CGGTCCGGCC CCCGCACGAT
GAGGATCTGC ATGAGCTCGT GGCCCACAGA TACGAACACG CGGCCACCAT CATCACCAGC
AACCTCGACT TTCTGGAATG GGACCGGGCG TTTGAGAATA AGCTCCTGGG GTCAGCCACC
ATCGACAGGC TCCGTCATGA CGCACACCTA GTCTACTTGG ACGGGCCGAG CTACAGGACC
CCGAAACCCA ACCAAAGCGT AAAAAAAGCA CCACCCAAAA CACCAAAACG GCCTAAAAAA
TGGGGGGTTC GCAACCGCAA AAATGGCTAC TCAAAGTGGC TCCATTAG
|
|---|
| Protein sequence | MQPKPDITPL LKKLRLSGML DSLEVRNKQA ISEKMPYTEF LSLLLSDEVA RRDQKKFTSR
MRKAGFKSSK TLEEFDFDFN PKIDRNQLYD LATCQFIHEK ACVLMTGPCG TGKSHIAQAL
GHYAIRRGFD VRFITQTKLL STLHGARATQ TYAKKFKALA QVPLLVIDDF GLKPVRPPHD
EDLHELVAHR YEHAATIITS NLDFLEWDRA FENKLLGSAT IDRLRHDAHL VYLDGPSYRT
PKPNQSVKKA PPKTPKRPKK WGVRNRKNGY SKWLH
|
|---|
| |