Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dret_0630 |
Symbol | |
ID | 8418442 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfohalobium retbaense DSM 5692 |
Kingdom | Bacteria |
Replicon accession | NC_013223 |
Strand | + |
Start bp | 757455 |
End bp | 758300 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 645037195 |
Product | flagellin domain protein |
Protein accession | YP_003197502 |
Protein GI | 258404760 |
COG category | [N] Cell motility |
COG ID | [COG1344] Flagellin and related hook-associated proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.892831 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000486769 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGGCACTTT CGATTAACAC CAATATGGCG TCGCTTCAGT CGCAGATGTC TTTGGCGAAC AGCACTCAGG CGTTGGAGCA AAACCAGCAA AGGTTGGCCA CTGGTCTGCG TATTAATTCT GCAGCTGATG ATGCAGCCGG ACTGACAATT ACGGATGGAA TGACTTCCCA GATTCGGGGA ATGAATCAAG CTGTCCGAAA TGCTAATGAT GGTATCTCAA TGGCCCAAAC CGCTGAAGGT GGGGCTAAAG AGATTACCAA TATGCTTCAG CGCATGCGTG AGTTGGCAGT TCAGGCAGCA AACGATACCA ATACTAATGC TGATAAAAAG GCACTGCAAC AAGAATTCGA CGAATTGGCC TCTGAAATAA GCCGCGTGGG TGAAGCAACA CAGTTCAATA CGAAAAATCT CCTTACTGGT ACGGAAGGTT CATCAGTAGC TATACAGGTT GGGCCTAACA ATACTGGTAA TGATACTATT AATATCGATC TAAGTGAAAA CTTGCGCGCT TCTGCTGCAG GCCTCGCTGT TGATAGTTTA ACTATAGGAA GTGGTTCAAC CTTATCTGAT ATTCAAGCAG CCATTTCAGG TATTGATACA GCTATCGGGA CAGTCGATGA GTTTCGCTCC GAGCTTGGTG CTACTCAAAA CCGACTTCAG TCGAGTATTT CGAATCTCGA AAATGCTGCA CAAAATCTTA CTGAATCCCG CTCTCGGATT ATGGATGCGG ATATCGCTAA AGAATCCGCG GAAATGACCC AGAATAATGT CCGCCAGCAG GCCTCAGCCG CTGTGTTGGC GCAAGCGAAT CAGCAGCCAC AACTTGCTTT ACAGTTGTTA GGTTAA
|
Protein sequence | MALSINTNMA SLQSQMSLAN STQALEQNQQ RLATGLRINS AADDAAGLTI TDGMTSQIRG MNQAVRNAND GISMAQTAEG GAKEITNMLQ RMRELAVQAA NDTNTNADKK ALQQEFDELA SEISRVGEAT QFNTKNLLTG TEGSSVAIQV GPNNTGNDTI NIDLSENLRA SAAGLAVDSL TIGSGSTLSD IQAAISGIDT AIGTVDEFRS ELGATQNRLQ SSISNLENAA QNLTESRSRI MDADIAKESA EMTQNNVRQQ ASAAVLAQAN QQPQLALQLL G
|
| |