Gene Dret_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0625 
Symbol 
ID8418437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp750009 
End bp751346 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content48% 
IMG OID645037191 
Producttransposase IS4 family protein 
Protein accessionYP_003197498 
Protein GI258404756 
COG category[L] Replication, recombination and repair 
COG ID[COG3666] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.5382e-10 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value6.54827e-11 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGGCTAGAG GGTTCATTAA AGGGCATCGA GATCAACTCT ACCTGTTGCC ACCTTCGATT 
GATGACTGGA TATCAAAAAA CCACAGTGTC AGGTTGATCG ATTCTTGTGT AGAAAATATT
GATTTATCAA TTTTTTATGA AAGCTACTCT CACGAGGGGA AGCCGCCTTA TGACCCTGCT
ATGATGATTC GTATTCTTAT TTATGCATAC AGCAAAGGAA TACGCTCTTC TCGGAAGATA
TCTGCTTTAT GCGAAGAAGA TATTGCTTTC CGGTGGCTTA CTGGAAATAT AATCCCTGAT
CATTCTGCTA TTTGCCGCTT CCGCGCTAAG CATAAAGAAA ATTTTAAGCA GCTTTTCCGA
GAAACAATCT GTTTGGCCGC TGAATCCGGT GCGTTAAAAA TAGGCAGTCT TTTTCTTGAT
GGAACTAAGG TGAAAGGCTC GGCTTCCTTG GAAGCCAATC GTAATCTCGA GCATATTAAG
CAAGACATTG AACGCATCGT GGACGAAGCT GAGGCAGTCG ATGCCAGTGA GGATAAGCAG
CTTGGCGAAG ATAACCGGGA TGATGTTTTG CCCCCTGAGC TTGCTGATCC CAAATCCCGG
TTGGAGCGAC TCAAGGCTGC CAAGGCCAGG CTGGAAGCTG AAAAAGAGGC TGCGGCGAAA
GAGTCTCGAG ATGACGACGA CTCAAATGGT CCTGGAGCTG GTACCGGTGA TGAAAAAACG
GCCACTGGCA ACAAAGAAAA AGCAAATATC ACCGATCCTG ACAGCAGAAT AATGAAAACA
CGGAACGGCT GGGTGCAAGG GTATAATTGC CAAGGAGTTT CAGACGAAAA TCAGTTTATT
GTCGCCAACG CGGTTACTCA AGACTGCAAT GACGCCCACC AACTCGAACC AATGCTCCAA
GCGGCTCAAG GCAACTTGTC CAAGATAGAG ACAGGCCAGA ACACCGAAAC CTTCTCGGCA
GATGCCGGTT ACTGGGCTGA GAAACTTGAT ATTTCAAAGA TCGAGAGCAA TGGCCCAGAG
GTGATTATGG CTACCCGCAA AGGCTGGAAG CAGCGAAAAC AAAACCGTGA AAAATCCCCA
CCTCGAGGGC GGATCCCCAA AGGGTTATCC CAGCGGGAGT TGATGGAACG AAAGCTACTG
ACCCAAAGAG GCCAGCGGAT CTATGCCAAG CGCGGACAAA CGATAGAAGC TATTTTCGGT
CAACTCAAGG AATGCCTTGG ATACAGGAAT TTTCTATTGC GTAGCCTCAA AAAAGTTCAG
GGTGAATGGG ACCTCCAATG TGCAGTGAGC AATATGCTCA AGCTGCTTCG GTTGTCAGGG
GCCACCACCA GTCAGTAG
 
Protein sequence
MARGFIKGHR DQLYLLPPSI DDWISKNHSV RLIDSCVENI DLSIFYESYS HEGKPPYDPA 
MMIRILIYAY SKGIRSSRKI SALCEEDIAF RWLTGNIIPD HSAICRFRAK HKENFKQLFR
ETICLAAESG ALKIGSLFLD GTKVKGSASL EANRNLEHIK QDIERIVDEA EAVDASEDKQ
LGEDNRDDVL PPELADPKSR LERLKAAKAR LEAEKEAAAK ESRDDDDSNG PGAGTGDEKT
ATGNKEKANI TDPDSRIMKT RNGWVQGYNC QGVSDENQFI VANAVTQDCN DAHQLEPMLQ
AAQGNLSKIE TGQNTETFSA DAGYWAEKLD ISKIESNGPE VIMATRKGWK QRKQNREKSP
PRGRIPKGLS QRELMERKLL TQRGQRIYAK RGQTIEAIFG QLKECLGYRN FLLRSLKKVQ
GEWDLQCAVS NMLKLLRLSG ATTSQ