| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0588 |
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| Symbol | flhA |
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| ID | 8418400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 709577 |
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| End bp | 711664 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 645037156 |
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| Product | flagellar biosynthesis protein FlhA |
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| Protein accession | YP_003197463 |
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| Protein GI | 258404721 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1298] Flagellar biosynthesis pathway, component FlhA |
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| TIGRFAM ID | [TIGR01398] flagellar biosynthesis protein FlhA
[TIGR01399] type III secretion protein, HrcV family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGAGG CGCTTCGGCA CAATAAATGG GTGGAGATTC TGCTACGCAG CGATATTATG
GTCGCCTTAG GTTTGGTGAC CATTTTGATG CTCATGATCA TCCCCCTGCC GCCGATGCTG
TTGGACCTCT TTTTGTCACT GAATATCACC GCCGGCCTGT TGATCCTGAT TATCACCCTC
TACACCCACC GTTCCCTGGA ATTTGCCATA TTCCCCACGG TGTTGCTTGC CACAACGTTG
TTTCGCCTGT CTCTGAACGT GGCCTCGACC AGACTCATCC TTCTCTATGG GGACACCGGC
CCCTATGCCG CAGGCAAAGT CATCTATTCC TTTGGCCAGT TTGTGGTTGG TGGCAATTAT
GTTGTCGGAA TCGTCGTGTT TATGATTTTG GTGGTTATCA ATTTTATCGT TATCACCAAG
GGGGCGGGCC GGGTGGCTGA GGTGTCGGCC CGGTTCACCC TGGATGCTAT GCCTGGGAAG
CAGATGGCCA TCGACGCCGA TCTCAATGCC GGACTGATCG ATGAGAACGA GGCCCGTCGT
CGTCGAGAGG ATATCGCGCA GGAGGCAGAT TTTTTCGGAG CCATGGATGG GGCGAGCAAG
TTCGTCCGTG GCGATGCCAT CGCCGGGATT ATTATTACCA TGGTCAACAT CGTGGCCGGG
TTCATTATTG GCGTGGCCCA GAAAGGCATG CCCATGATGG AGGCGGCCCA GAACTACACC
ACCCTGACTG TAGGCGATGG TCTAGTTAGT CAGATTCCGG CGCTTATCAT TTCTACTGCA
GCAGGCATCC TGGTTTCTCG GGCTGGTGGC ACTGGGGATC TTGGCTCGGC ACTGTCCAAA
CAGATCACGT TCAACCCCCG AGCGATCTGG GTTGTTGCTG GCATCCTGTT GCTGTTCGCC
CTTATTCCGG GGCTGCCCTT TGTGCCCTTT TTGATTTTGA GTGGGCTTTT GGCCTTTTTG
GGCTATACCC TCCATAAACA GGCGCTGCAG GCTGAGGCGT TGGAAGCAGC TGCCGAGCCA
GAGGCGCCAG CGGTGGAGCA AGAGGAAAAC TACGAGAACA TGCTTCAGGT GGAAATGTTG
GAATTGGAGA TCGGTTACGG GGTCATCCCC TTAGTCGACG CGAGTCAGGG CGGCGAAATG
TTGGAACGTA TCAAGTCTAT CCGTAAGCAG TTTGTGCTCT CGCATGGATT CATCGTGCCG
CCCATTCATA TCAAGGACAA TTTGCAACTG AAACCCAATG AATATGTGCT CAACCTTAAA
GGCGAACAGG TAGCCCGGGG GGAGGTCTAT CCCCGGCAAT TCATGGCTAT GGATCCGGGC
ACGGCCACGG AGAAGATCCA GGGCACGCAG ACCACAGAAC CCGCCTTCGG CCTTCCGGCG
ACTTGGATCA GCGAAGACAA GCGTGAACGC GCCCAAGTGG CTGGATACAC TGTGGTTGAC
TGCCCAACGG TCATGGCTAC TCACGTTAGC GAGGTCATCA AGGCCTATGC CCACGAGCTG
ATTGGGCGGC AAGAGGTACA GAATTTGCTA GATACTGTTG CCAAGGACTA TCCCAAACTT
GTGGAGGAGT TGGTGCCGAA TCTCCTCAGT TTGGGTGGGG TCCTGAGGGT AATGCAGAAC
TTGCTCAAAG AAGACGTTTC CATCAGGGAT TTGCGAACTA TTCTGGAAAC TTTGGCTGAT
CACGCCGGAC ATACTCAAGA TCTGGATCAA TTGACCGAAT TTGTTCGTCA AGCCCTGGCC
CGTCACATCA GTAGCAAATT TGCCCAGCCA GATAATACCA TCCCGGTGCT CACATTGGGC
CAGGATATTG AAGAAACGGT GCGCCAATCC GTGCAGCAGA CCGGGCAAGG TCCGGTTTTG
GCCTTGGATC CGCAAAAGGC ACAGAGCATC ATTCAGCAGG TGAGTGAACA TTTACAAAAA
GTGGGGCAGG GCGCTCCGGT GGTCCTGCTC TGTCCGTCAA ATATCCGACT GTATGTCCGT
AAGTTGACGG AACGGTATTT GCCCCGGCTC GCGGTTTTGA GCCACGCCGA GATCTCACCG
GACATGAAGG TCCGATCAGT AGGAACGGTC AGCTTGTATG CAAATTAA
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| Protein sequence | MIEALRHNKW VEILLRSDIM VALGLVTILM LMIIPLPPML LDLFLSLNIT AGLLILIITL
YTHRSLEFAI FPTVLLATTL FRLSLNVAST RLILLYGDTG PYAAGKVIYS FGQFVVGGNY
VVGIVVFMIL VVINFIVITK GAGRVAEVSA RFTLDAMPGK QMAIDADLNA GLIDENEARR
RREDIAQEAD FFGAMDGASK FVRGDAIAGI IITMVNIVAG FIIGVAQKGM PMMEAAQNYT
TLTVGDGLVS QIPALIISTA AGILVSRAGG TGDLGSALSK QITFNPRAIW VVAGILLLFA
LIPGLPFVPF LILSGLLAFL GYTLHKQALQ AEALEAAAEP EAPAVEQEEN YENMLQVEML
ELEIGYGVIP LVDASQGGEM LERIKSIRKQ FVLSHGFIVP PIHIKDNLQL KPNEYVLNLK
GEQVARGEVY PRQFMAMDPG TATEKIQGTQ TTEPAFGLPA TWISEDKRER AQVAGYTVVD
CPTVMATHVS EVIKAYAHEL IGRQEVQNLL DTVAKDYPKL VEELVPNLLS LGGVLRVMQN
LLKEDVSIRD LRTILETLAD HAGHTQDLDQ LTEFVRQALA RHISSKFAQP DNTIPVLTLG
QDIEETVRQS VQQTGQGPVL ALDPQKAQSI IQQVSEHLQK VGQGAPVVLL CPSNIRLYVR
KLTERYLPRL AVLSHAEISP DMKVRSVGTV SLYAN
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