Gene Dret_0587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0587 
SymbolflhB 
ID8418399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp708516 
End bp709580 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content54% 
IMG OID645037155 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_003197462 
Protein GI258404720 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCAAC AAGGTGACGA GGAACGCACA GAAGAACCAA CGGAAAAACG CCGGCGGGAG 
TTTCGAGAAG AAGGCAAGGT TGCCCAGAGC AAGGAAGTTA ATACCGCCTT GCTCCTGTCC
ACGGCGTTGC TATTGTGGTT TTGGTACGCC CCGAATTTTG TGGAGGGGTT GGAGCGATTT
TTGGCTGGGT TTTGGGATCA GGCCGGCTAC TGGAACGTAA CTCCCCAAGC TGTTGTCGGC
TGGTTGGGCA AGGGGCTGAT CCATCTCGGT CTGCTTTTGT CGCCGATACT GATTCTCTCC
ATTGTCGTCG GCTTTTTGTC TAGCTATATC CAGTTCGGGT GGCTTTTCAG CCCGAAAGCG
TTGCAGCCGG ATATAAAAAA GCTTGATCCC ATCCAGGGCG CAGCAAAATT TGTCTCCAAA
CGCTCGGCCA TGGAGTTGCT CAAATCCCTG GCCAAGGTCG CGGTGGTGGG CTCAGTTGCC
TATTGGACAC TGTCGGATCA TTTTGAGCAA GCTATCCAGC TGATAGGCCA ACCTATTGAG
CGTATTTTTG TCTTTATCGG TTGGACGGCG GCGGAGATCC TGCTTAAGTG TTGCATAGCT
CTGCTGTTTA TCGCGGTCAT CGATTTTGCC TATACCAAAT GGGAAATGGA AGAACAGATG
AAGATGACCA AAAAAGAGCT GCAGGATGAG CATAAGGAAA CCGAGGGGGA TCCGCAGCTC
AAGCAGCGCA TGCGCTCTAT TCAACGGGAC ATGGCCCGCA AGCGGATGAT GGCTGAAGTG
CCCCAGGCGG ATGTGGTTAT CACCAACCCA ACCCACTACG CCGTGGCCCT TCGCTATGAC
CGCTCAAGCA TGGAAGCCCC GGAGGTGACC GCCAAGGGGA GCAATATCGT CGCCCAACGC
ATTCGAGAGA TCGCCGAAGA AAGTGGGGTG CCTCTGGTGG AAAATCCGCC GGTGGCGCGA
GTGTTGCACG GTCTTGAGCT CGGGGAAACA GTCCCGGAAT CCATGTATAA GGCTGTGGCC
GAGATCCTGG CCTATGTCTA CAGCCTGAAA GGAAAAACCG CATGA
 
Protein sequence
MAQQGDEERT EEPTEKRRRE FREEGKVAQS KEVNTALLLS TALLLWFWYA PNFVEGLERF 
LAGFWDQAGY WNVTPQAVVG WLGKGLIHLG LLLSPILILS IVVGFLSSYI QFGWLFSPKA
LQPDIKKLDP IQGAAKFVSK RSAMELLKSL AKVAVVGSVA YWTLSDHFEQ AIQLIGQPIE
RIFVFIGWTA AEILLKCCIA LLFIAVIDFA YTKWEMEEQM KMTKKELQDE HKETEGDPQL
KQRMRSIQRD MARKRMMAEV PQADVVITNP THYAVALRYD RSSMEAPEVT AKGSNIVAQR
IREIAEESGV PLVENPPVAR VLHGLELGET VPESMYKAVA EILAYVYSLK GKTA