Gene Dret_0583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0583 
Symbol 
ID8418395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp706158 
End bp706547 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content56% 
IMG OID645037151 
Productflagellar biosynthesis protein FliO 
Protein accessionYP_003197458 
Protein GI258404716 
COG category[N] Cell motility 
COG ID[COG3190] Flagellar biogenesis protein 
TIGRFAM ID[TIGR03500] flagellar biosynthetic protein FliO 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATCGG TATCGATGAC TGTGGCCCAT GCCGTAACCG CTGCCGCTTC AAATGCGACA 
GCTGGTTTGA CAACAGAGCC AGTATGGCCC GCCATGATCA AAATGGTGGC CGGGCTTTTG
ATCATTCTCG GCCTGTTGTA CATGGGCTCG GCACTGTTGC GGCGCTGGCA ATTTGGCGGC
AGCAATTCCA GGCAGGGAAT TATCTCCATC AAGGAATCGC GTCCCTTGGG CGCCAAGCGC
ATGTTGTGTC TCGTCGAGGT TCGGGGACGT GAGGTGCTCT TGGGGGTGAC GCCGGATCGT
ATCGAGCCGT TGTGTCACCT CGAGGTCACC GAGGAGAACC ATGAAACTTC CTCTTTTGAC
GCTGAACTCA AACATCGCCA TTCCCAATGA
 
Protein sequence
MISVSMTVAH AVTAAASNAT AGLTTEPVWP AMIKMVAGLL IILGLLYMGS ALLRRWQFGG 
SNSRQGIISI KESRPLGAKR MLCLVEVRGR EVLLGVTPDR IEPLCHLEVT EENHETSSFD
AELKHRHSQ