| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0560 |
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| Symbol | |
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| ID | 8418372 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 672265 |
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| End bp | 674238 |
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| Gene Length | 1974 bp |
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| Protein Length | 657 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 645037128 |
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| Product | 5-oxoprolinase (ATP-hydrolyzing) |
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| Protein accession | YP_003197435 |
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| Protein GI | 258404693 |
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| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0145] N-methylhydantoinase A/acetone carboxylase, beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.341867 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCATTA TCGGTGTGGA TACCGGAGGG ACATTCACGG ATTTCATCTA CAAGAAAGAC
GGCGAGTGGG GAGTCTACAA GACATTGTCG ACTCCGGACA ATCCAGCCCG TGCCGTTATT
GAGGGGCTGA AACACATAGC CCAGGGGCGG GAAATGCAAG TGGTGCACGG CTCGACCGTA
GCCACCAACG CTGTTTTGGA GCGTAAAGGT GTCCCCACAG CGATTGTGAC CAATGCCGGC
TTCGAAGATT TGTTGCATAT CGGGCGTCAA AACCGGGGTG ATCTGTATGA TCTGTCCTAC
ACCAAGCCCG CGCCTATTGT AGATCGGTGT GCCTGCTATG GGGTGCCGGG ACGAATCGAC
AGCAACGGGG AGGAACGTGA CCCCGTGGAT TTGGAGGCTG CACGAAAGGT TGTGCAGGAA
TTGCAGTCTT CTGGAATTGA ATCCGTGGCC GTGTGTTTTT TATTCTCCTA CCTCAATCCG
AGCCACGAAC AGGCCGTTCA ATCCGTGCTC GAGGAATTGG AAATCCCGGT TTCAGCTTCG
CACCAGATCC TGGCTGAGTT TCGCGAGGTC GAGCGTTTGT CGACCACGGT GGTCAACGCC
TATGTCTCGC CGAAGATGTC CCGGTATCTT GATGTGTTGA AGGAGTTCAC CGGGGAAAAG
GGATTGCGCG TCATGCAGTC CAACGGCGGA AGCATCTCGG TGGATACAGC CATGCAAGAG
TCGGTGCGCA CAATCCTCTC CGGGCCGGCC GGCGGGGTTG TTGGGGCATT GGAACTGGGG
CGGGCCGCCG GTTTCGAAAA GTTGATCACC TTTGATATGG GAGGCACCTC TTCCGACGTC
AGTCTCATTA ACGGCGAATT GCCCTTGTCG CTGGAGACTA CCTTGTCAGG CTATCCCCTG
AAGGTCCCTA TGCTGGATAT CCATACCGTG GGGGCTGGGG GCGGCTCCAT TGCTACCCTT
GATGCCGGGG GCTCCCTGAA AGTGGGGCCG GAAAGTGCCG GAGCAGACCC CGGCCCCATC
TGTTACGGCA AAGGGGCGCA GATCACAGTG ACCGATGCCA ACCTGTTTCT GAGCCGTTTG
ATAGCCGACC GCTTTCTCGG CGGGGCAATG CAACTGGACG GGGCAAGGAT GGACGCGGCC
TTTGCCGACA TGGCTGAAGA GGCGGGGCTC TCCGCCCTGG CTTTGGGGGA GGGAATTCTG
GATGTGGCCA ATACCAATAT GGAACGGGCC ATCCGGGTCA TCTCCGTTGA GCGTGGCTTT
GACCCTCGGG AATTTACCCT GTTTTCCTTC GGGGGCGCCG GGGGATTGCA TTGCGCCTTT
CTGGCCCGAC TCCTTTCCAT GCCCCGGGTG TTGATTCCTA AAAATCCAGG CATCCTGTCT
GCTGTGGGTA TGTCCATGGC AGATGTCATC AAGGACTATT CCCAAACGGT CATGCTCCCC
GGGATGACCC ATAGCGGTCC CGACGTGGAA AACGCTTTTG CGCCTCTGGA GCAGCAGGCC
GCGACGGAAA TGGCCGATGA GGGCTTTGCA GGGGCTTCCT TGTATCTGGA GCGATTCGTT
GACATGCGCT ATCAAGGTCA ATCGTTTGAG ATTATCGTTC CCTTTGATGA AGCGTTTCTG
GAGCGATTTG GGCAAATGCA CGAACAAAAA TACGGCTATT GCCATCCGGG AAAACCGACC
GAGATTGTCA ATCTGCGTCT TCGGGCCAGG GGCGTGCCAG AAAAACCTGT TTTTTCGGCC
ACTACAGAGT TGAGCGAGCG CATCCCGGAA GAAGCCTGGC TGGATACCCT TGACGTGGTT
TTTGAGGGGC AGTCCCGGCA GACATGGGTC GTCCAGCGCG ACCGGCTTCT GCCCGGCAAT
CGCTTTGAGG GCCCCGCCAT TGTCGTTGAA TACACGTCGA CGATCGTCGT GCCGCCTTTT
GCCTGCGCTG AAGTCGATCC ATTCGGCAAT CTGCTTTTAC ATATCCGCTC CTGA
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| Protein sequence | MVIIGVDTGG TFTDFIYKKD GEWGVYKTLS TPDNPARAVI EGLKHIAQGR EMQVVHGSTV
ATNAVLERKG VPTAIVTNAG FEDLLHIGRQ NRGDLYDLSY TKPAPIVDRC ACYGVPGRID
SNGEERDPVD LEAARKVVQE LQSSGIESVA VCFLFSYLNP SHEQAVQSVL EELEIPVSAS
HQILAEFREV ERLSTTVVNA YVSPKMSRYL DVLKEFTGEK GLRVMQSNGG SISVDTAMQE
SVRTILSGPA GGVVGALELG RAAGFEKLIT FDMGGTSSDV SLINGELPLS LETTLSGYPL
KVPMLDIHTV GAGGGSIATL DAGGSLKVGP ESAGADPGPI CYGKGAQITV TDANLFLSRL
IADRFLGGAM QLDGARMDAA FADMAEEAGL SALALGEGIL DVANTNMERA IRVISVERGF
DPREFTLFSF GGAGGLHCAF LARLLSMPRV LIPKNPGILS AVGMSMADVI KDYSQTVMLP
GMTHSGPDVE NAFAPLEQQA ATEMADEGFA GASLYLERFV DMRYQGQSFE IIVPFDEAFL
ERFGQMHEQK YGYCHPGKPT EIVNLRLRAR GVPEKPVFSA TTELSERIPE EAWLDTLDVV
FEGQSRQTWV VQRDRLLPGN RFEGPAIVVE YTSTIVVPPF ACAEVDPFGN LLLHIRS
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