Gene Dret_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0550 
Symbol 
ID8418361 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp661521 
End bp662399 
Gene Length879 bp 
Protein Length292 aa 
Translation table11 
GC content56% 
IMG OID645037117 
Productacetylglutamate kinase 
Protein accessionYP_003197425 
Protein GI258404683 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0548] Acetylglutamate kinase 
TIGRFAM ID[TIGR00761] acetylglutamate kinase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAGG AAATCGCCAA AGCCAAAATC CTTTTAGAAT CCCTTCCGTA TATCCGCGAA 
TTTTACGGGC AGACCATCGT CATCAAATAC GGCGGCCACG CCATGAAAGA CGAGACCCTC
AAACACGCCT TCGCCTTAAA TGTAGTCCTG CTCAAATATA TCGGTTTGAA TCCGGTCATC
GTCCACGGTG GCGGCCCTCA GATCGGACAT ATGCTGGAAC AACTTCAGAT CGACTCCCAA
TTTCGAGAAG GTCTGCGTAT TACCGATCAA GCAACCATGG ATGTGGTGGA AATGGTTCTC
GTGGGCAAGG TCAACAAGGA AATCGTCAAT CAGCTCAATC TCAGCGGGGG CAAAGCGGTC
GGCCTTTCCG GCAAGGATGG CGGCCTGATC CAGGCCAGAC AACTGGAAAT GGTCATCTCC
CGGAAAGACG CGCCCCCGGA GATCATCGAT CTGGGCAAAG TCGGGGAAGT CGTGCACATC
AACACCACGC TGATCGACTC CCTCCAACGC GACGGTTTCA TTCCCATCAT TGCCCCGGTG
GGCGTCGATG CCCACGGCGA AACCTACAAT ATCAACGCGG ACTCCGTGGC CGGGGCTATT
GCCGCTGCCA TCAACGCCAA GCGTCTGGTG TTGTTGACCG ATGTCCAGGG CATCCTGGAT
CCTGCCGGCA CACTTATTTC CTCGTTGACC AGAAGACAGG CCGCGGAAGC CATCGACAAC
CATGTCGTCC GTGGCGGGAT GATCCCCAAG GTCAAGTGCT GCCTGGAGGC AGTCGAAGCC
GGCATTGAAA AGGCCCACAT CATCGACGGC CGGGTCGAAA ACTCCCTTAT TCTGGAGCTT
TTCACCAAAG CCGGCAGTGG TTCCGAGATT GTGGCCTGA
 
Protein sequence
MEQEIAKAKI LLESLPYIRE FYGQTIVIKY GGHAMKDETL KHAFALNVVL LKYIGLNPVI 
VHGGGPQIGH MLEQLQIDSQ FREGLRITDQ ATMDVVEMVL VGKVNKEIVN QLNLSGGKAV
GLSGKDGGLI QARQLEMVIS RKDAPPEIID LGKVGEVVHI NTTLIDSLQR DGFIPIIAPV
GVDAHGETYN INADSVAGAI AAAINAKRLV LLTDVQGILD PAGTLISSLT RRQAAEAIDN
HVVRGGMIPK VKCCLEAVEA GIEKAHIIDG RVENSLILEL FTKAGSGSEI VA