| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0536 |
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| Symbol | |
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| ID | 8418344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | - |
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| Start bp | 644879 |
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| End bp | 645916 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 645037100 |
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| Product | ApbE family lipoprotein |
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| Protein accession | YP_003197411 |
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| Protein GI | 258404669 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA CTGCAAGCAA CGACGTCCAA TCCACACGCC GCTCTTGTCT GAAATTCCTT
GGTCTCGGCG CCTTGGGGAT CGCCACACCT ATGCTCGCCG CGCGCCCCGG ACAAGCGGCC
CAGGATCTGC CTCAGGCGCA AAGCACTCGT CCCTTGATGG GGACCATGGT CACGGTCACG
GTTCTGGATT CCTCCCGTGA CAAGGCCCAT GAAGCCGCGC AAAGCGCCCT GGACACCATG
CAGGCCCTAA CCCCGGTGCT GGACCGCCAC GCACCCGGGA CACCTTTGAG TGAACTCAAT
GCCCAGGGCC GGTTGAAGGA TGTGCCGCCG CAACTCGCCG CCGTATTGTA CCAGGCTGGC
TATTTCTATA CTGTCAGCCA GCGGGCCTTT GATGCGAGTA TCCTGCCCCT GTTGACCCTG
ACCAAAGAGA CCTTTGCGAA CCACGGTGAG GCCCCCTCGG AGACGGCCGT ACGCCGGGTC
CGCGACCGTA TCGGGTTCGA TAAGGTCCAC ATTGGCCCCG ACGGCGTGCA ACTCCAGGAC
GGCATGCAGC TGACCCTGGA CGGTATCGCC AAAGGGCATA TCATCGATCA GGCGGCCAAT
ACCTTACAAC AAATGGGGAT CCGCTACGCC CTGATCAACG CCGGAGGCGA TATCCGGGCC
CTGGCTGGCA AAGGCCCCGG TGCAGCGTGG CGGGTCGGGA TCAAAGATCC ACGAGGCCGC
AAACCGTTTA TCCAGACCAT GGCTCTTAAT AATGGGGCTC TGGCGACGTC CGGCAACTAC
GAACACTATT TCGACCGCAA TAAGGCCCAC CACCATATTA TTGACGCCAA TTCCGGCCAT
TCCCCGCGGG CAGTCAGCAG TGTCAGCGTG GTCGCGCCTA CAGTGGCAGA AGCCGACGCC
CTGTCCACCA CCCTGTTTGT CAAACCGCGT CCAGAGGCCG TCGCCTTTGC CAATTCGCTT
CCGAATACCG AGGCCCTGCT TCTCGACGAC GAACTGCGTG AAACGCACAC GCAGGGATGG
CTGGGGGAGT GGGCCTAA
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| Protein sequence | MSKTASNDVQ STRRSCLKFL GLGALGIATP MLAARPGQAA QDLPQAQSTR PLMGTMVTVT
VLDSSRDKAH EAAQSALDTM QALTPVLDRH APGTPLSELN AQGRLKDVPP QLAAVLYQAG
YFYTVSQRAF DASILPLLTL TKETFANHGE APSETAVRRV RDRIGFDKVH IGPDGVQLQD
GMQLTLDGIA KGHIIDQAAN TLQQMGIRYA LINAGGDIRA LAGKGPGAAW RVGIKDPRGR
KPFIQTMALN NGALATSGNY EHYFDRNKAH HHIIDANSGH SPRAVSSVSV VAPTVAEADA
LSTTLFVKPR PEAVAFANSL PNTEALLLDD ELRETHTQGW LGEWA
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