Gene Dret_0526 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDret_0526 
Symbol 
ID8418334 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfohalobium retbaense DSM 5692 
KingdomBacteria 
Replicon accessionNC_013223 
Strand
Start bp636877 
End bp637695 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content58% 
IMG OID645037090 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_003197401 
Protein GI258404659 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0555] ABC-type sulfate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGAAAC GCGATCCATT TTCCCTCGCT GTCGGGTTTT CCGGAAGCAC GATCCTGCTG 
TTTATCCTCC TGCCTCTGCT TCAGATGGTC GTGCAGCCGT CATTGCCGGA TATGGCCGAA
ACCATTCGTG ACCCCGCGGT GCGCAAAGCC ATTGGTCTGA GCCTGTTCAC CTCCGGGATG
GCGGCGGTGA TTGCCTTGGT TCTTGGCACG CCGCTGGCTT ATATTCTGGC CCGCAAGGAT
TTCTGGGGCA AACGGGTGGT GGAGAGCGTC ATTGATCTCC CGATTATGAT CCCGCATCCG
GTTATTGGCA TTGCCATTTT GAGTCTGGCC GGACGGGGCC ATTGGCTCGG GGATGTGCTC
CAAGCACTGG GCGTTAAGCT TATGGGGACG ACCACGGGGA TTGTCGTCGT TTTGACCTTC
GTCGGCGTGC CCTTTTACGT CAACGCTGCC AAGGCCGGGT TTGAGGTTGT GCCCGCCCGC
CTGGAGCATG TGGCTCGAAC ACTGGGCGCG AGCCGGAGCA GCGCCTTTTA TCGGGTGACT
CTGCCATTGG CGTTTCGCAG CCTGCTTGCA GGGACAATCA TGTGCATGGC TCGGGCAATC
AGTGAATTTG GAGCAGTTGT CATCGTTGCG TATCATCCGA TGGTCGCTCC GGTGCTGATT
TATGAACGAT TCACTGCTTA TGGGCTCAAG TATTCTCAGC CGGTGGCGGT CTGGCTTATT
CTGGTTTCCC TGTTCCTTTT CCTGTTGCTG CGCATTGTGA CTGCCAGAGG GGGAGGAATG
GCTGGACGCA GTGGTCCGAA TCTCGGGGGG CGGGCATGA
 
Protein sequence
MLKRDPFSLA VGFSGSTILL FILLPLLQMV VQPSLPDMAE TIRDPAVRKA IGLSLFTSGM 
AAVIALVLGT PLAYILARKD FWGKRVVESV IDLPIMIPHP VIGIAILSLA GRGHWLGDVL
QALGVKLMGT TTGIVVVLTF VGVPFYVNAA KAGFEVVPAR LEHVARTLGA SRSSAFYRVT
LPLAFRSLLA GTIMCMARAI SEFGAVVIVA YHPMVAPVLI YERFTAYGLK YSQPVAVWLI
LVSLFLFLLL RIVTARGGGM AGRSGPNLGG RA