| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dret_0513 |
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| Symbol | |
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| ID | 8418321 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfohalobium retbaense DSM 5692 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013223 |
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| Strand | + |
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| Start bp | 623103 |
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| End bp | 625550 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 645037077 |
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| Product | ATP-dependent protease La |
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| Protein accession | YP_003197388 |
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| Protein GI | 258404646 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0466] ATP-dependent Lon protease, bacterial type |
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| TIGRFAM ID | [TIGR00763] ATP-dependent protease La
[TIGR00764] lon-related putative ATP-dependent protease |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00559437 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGATA CCTACACGAC AGGGACTGGT GGGATGCAAC TGCCAGTGAT GACCTTACGG
GAAGTGGTCA TGTTTCCCAG GGCTATCGTG CCGCTTTTTG TGGGCCGCAA GGCTTCCATT
GCAGCTGTCG AACACGCTTT GGAACAATAC AACAAACGTA TCCTCCTGGT GGCTCAGAAA
GAACCTGAAG TGGAAACCCC TGGGCAGGAC GACCTGTTTG CCATGGGGGC GATCTGTAAG
ATTCTGCAAC TCTTGCGTCT GCCCGACGGG ACGGTCAAAG TCCTTTTTGA AGGGCAAAAT
CGGGCCTATT GGCGTCCGGT CGAGGACCGG TTTTCGTTTG AAGGTGAAAG TGTGGCCCTG
GCCGAAGTGC AGATGCTGCA AGAGAATGAT CCGGACAATC CTGAAGCGCG GGCCTTGATC
CGGACCACCC AGGAAGCCGT TCAGAAATAC AGCAAGATCA ATAAACAATT GGCCCAAGAG
ACCTTGATGG CCATCTCGTC CATTGATCGC CCGGGGCGCC TGGCTGATGT CATCATGCCC
CACTTGAAGG TCGAATATAC CCAGAAGCAG GCTGTGCTGG AGGTCCAGGA CCCGCTCGAA
CGTCTGGAAC AGACCTATGC TCTGCTGGAA GGGGAGATCG AGGTCTCGAG CCTGGAACGG
CAGATCAAGA GCCGGGTCAA AGACCAGATG CAGAGCAATC AGCGGGATTA TTATCTCAAT
GAGCAGCTCA AGGCCATCAA AAAGGAAATG GGCCAGGAGG ACGACCCTCA GGCCGAACTC
GATGAGCTTC TCGAACGGTT GCAAGCCAAG GATATGCCGG ACCACGCCCG GGAGAAAGCG
GAAAAAGAGA TCAAAAAATT GCGGCAGATG CCGCCCTCAT CCGCGGAATA CACTGTGGTT
CGCAACTATA TCGATTGGAT TTTAGACCTG CCCTGGAATC ATCTCAAGCA GACCGAACTC
GATCTGCAAC AGGCGGAGCA GATTCTCGAC GAAGACCATT ACGGTCTGGA AAAGCCCAAA
CAACGCATTC TCGAATATCT TGCCGTCCAG ACCCTGGTGG AGAAGATGCA GGGGTCGATA
TTGTGTTTTG TTGGGCCCCC TGGCGTGGGA AAAACTTCGC TGTCCAAGTC CATAGCTCGT
TCCACGGGCA GAGAGTTCGT GCGCCTCTCC CTTGGAGGCG TGCGCGACGA GGCCGAAATC
CGGGGGCACC GGCGGACCTA TGTGGGAGCC TTGCCCGGCA AGATCATCCA GTCCCTGAAG
CGGGCGCAAT CCAATAATCC GGTCTTCTGT CTCGATGAAG TCGACAAGAT GAGTATGGAT
TTCCGGGGCG ATCCGTCGGC AGCCCTGCTC GAGGTTCTGG ACCCCGAACA GAATGTGGCC
TTCAACGACC ATTATCTCGA TCTGGACTAC GATTTATCGC ATATTTTCTT CATCACTACG
GCGAATTATC TGGAGGCTAT CCCGGCTCCT TTGCGAGATC GCATGGAGAT CATCAAGCTT
TCCGGATATC TGGAGACGGA GAAGCTCCAG ATCGCCCGGA AATTTCTGCT TCCCAAACAA
TTGCATAAAA ATGGACTTGA CCCTGAACAG GTTTCCGTTT CGGACGGAGC GCTTTTGGAA
GTGATCCGTC GCTATACCCG GGAAGCCGGT GTCCGGAATC TGGAGCGGCA AATCGCTTCT
ATCTGCCGCA AGCTGGCCAA GGAAAAGGTT GAGGGCAAAG GGGAGATCCG TTCCTCCAAG
GTCACCAAAA CCTCTGTCGG TAGTTTGCTT GGAGTCCCGG ATTATCGCTA TGGCCAACGA
GAAAAAGAAC CCCAGGTTGG TGTGGCCACC GGCTTGGCCT GGACGGAGAT GGGCGGCGAA
TTGCTGCTTG TCGAAGTCGC GCTCATGCCC GGCAAAGGGA AGGTAGAAAT TACCGGCAAG
ATCGGTGACG TCATGCAGGA ATCCGCTCGG GCCGCACTCA GTTATATCCG GTCACGTTCG
GATCTGTTTG GGTTGCGCTC TGATTTTTAC GAAGGGATTG ATGTCCATGT CCATGTGCCC
GAGGGGGCCA CGCCCAAGGA TGGCCCTTCC GCTGGAATTA CTCTGGCGAC GAGCCTTATC
TCCGCGTTGC TGCACATTCC GGTACGCAAT GATGTGGCGA TGACCGGCGA AATCACCCTC
AGGGGCCGGG TGCTGCCCAT CGGCGGCTTG CGGGAAAAGC TCTTGGCCGC CCACCGCGGA
CTGATTCGTA CCGTGTTGAT CCCCAAGGAT AACGAAAAGG ACCTCAAGGA GGTCCCGGAA
GCGATCCGCC GTGATCTGGA GATTCTGCCC GTGGAACACA TGGATGATGT GTTGCCTCTG
GCCCTGCTGG ACAGTCCCGC AGAGAATCTT TTCTGCGGTC GTGACGACGA AAATATTCCT
CTGGCACGGC GACTGCGCAA GGAGGAATCC TTGCCTCCCA CGCATTAG
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| Protein sequence | MPDTYTTGTG GMQLPVMTLR EVVMFPRAIV PLFVGRKASI AAVEHALEQY NKRILLVAQK
EPEVETPGQD DLFAMGAICK ILQLLRLPDG TVKVLFEGQN RAYWRPVEDR FSFEGESVAL
AEVQMLQEND PDNPEARALI RTTQEAVQKY SKINKQLAQE TLMAISSIDR PGRLADVIMP
HLKVEYTQKQ AVLEVQDPLE RLEQTYALLE GEIEVSSLER QIKSRVKDQM QSNQRDYYLN
EQLKAIKKEM GQEDDPQAEL DELLERLQAK DMPDHAREKA EKEIKKLRQM PPSSAEYTVV
RNYIDWILDL PWNHLKQTEL DLQQAEQILD EDHYGLEKPK QRILEYLAVQ TLVEKMQGSI
LCFVGPPGVG KTSLSKSIAR STGREFVRLS LGGVRDEAEI RGHRRTYVGA LPGKIIQSLK
RAQSNNPVFC LDEVDKMSMD FRGDPSAALL EVLDPEQNVA FNDHYLDLDY DLSHIFFITT
ANYLEAIPAP LRDRMEIIKL SGYLETEKLQ IARKFLLPKQ LHKNGLDPEQ VSVSDGALLE
VIRRYTREAG VRNLERQIAS ICRKLAKEKV EGKGEIRSSK VTKTSVGSLL GVPDYRYGQR
EKEPQVGVAT GLAWTEMGGE LLLVEVALMP GKGKVEITGK IGDVMQESAR AALSYIRSRS
DLFGLRSDFY EGIDVHVHVP EGATPKDGPS AGITLATSLI SALLHIPVRN DVAMTGEITL
RGRVLPIGGL REKLLAAHRG LIRTVLIPKD NEKDLKEVPE AIRRDLEILP VEHMDDVLPL
ALLDSPAENL FCGRDDENIP LARRLRKEES LPPTH
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